M. lignano Single Cells
Mlig455
transcriptome Search Clusters Lineages Gates Plates Cells Vs. Smed Download

MligTC455_21498 (GRIK2)

Mlig455 TC Mlig455 genes Homologs Pfam Full annotation
MligTC455_21498 Mlig455_020602 GRIK2; GluRIIA; Grik2 Bacterial extracellular solute-binding proteins, family 3 Mlig455_020602:
{Pfam: Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=41.1]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=36.9]}
{Human: ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=65.1, Expect=2e-10]; ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=63.5, Expect=5e-10]}
{Mouse: ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=65.5, Expect=9e-11]; ENSMUSG00000001985, Grik3, glutamate receptor, ionotropic, kainate 3, [Score=63.5, Expect=3e-10]}
{Dmel: FBgn0004620, GluRIIA, Glutamate receptor IIA, [Score=54.7, Expect=1e-07]}
{Celegans: WBGene00001615, glr-4, GLutamate Receptor family (AMPA), [Score=51.2, Expect=1e-06]}
{Smed: dd_Smed_v6_20242_0_1, dd_Smed_v6_20242_0_1, [Score=51.2, Expect=1e-06]}

Links: Tomoseq.

Expression, Z-scaled

Variance, Z-scaled

Clusters

Expression, raw

Similar genes by expression

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
1. MligTC455_21499 0.926 Mlig455_020553
Mlig455_044503		 GRIK2; GluRIIA; Grik2 Bacterial extracellular solute-binding proteins, family 3;
Ligand-gated ion channel		 Details
2. MligTC455_27000 0.49 Mlig455_012530 EF-hand domain pair Details
3. MligTC455_39986 0.49 Mlig455_034171
Mlig455_040378		 ASIC1; Asic1 Amiloride-sensitive sodium channel Details
4. MligTC455_07484 0.396 Mlig455_010287
Mlig455_065668
Mlig455_065669		 CG3822; GRID1; GRIK4; GluRIIC; Grid1; Grik4 Ligand-gated ion channel;
Ligated ion channel L-glutamate- and glycine-binding site		 Details
5. MligTC455_32028 0.37 Mlig455_019343
Mlig455_019346		 CG11155; GRIA2; Grik2 Ligand-gated ion channel;
Receptor family ligand binding region		 Details
6. MligTC455_05628 0.348 Mlig455_037398 LHX9; Lhx9; ap LIM domain Details (TF)
7. MligTC455_30809 0.346 Mlig455_030946 GRM6; Vmn2r104 7 transmembrane sweet-taste receptor of 3 GCPR Details
8. MligTC455_50789 0.346 Mlig455_033062 Details
9. MligTC455_40334 0.34 Mlig455_060664 Details
10. MligTC455_45565 0.334 Mlig455_017877 ARF3; Arf3; Arf79F ADP-ribosylation factor family Details
11. MligTC455_03076 0.334 Mlig455_023789 Details
12. MligTC455_21805 0.334 Mlig455_039212 Details
13. MligTC455_53532 0.334 Mlig455_048002 Details
14. MligTC455_03288 0.334 Mlig455_050215 Details
15. MligTC455_25855 0.334 Mlig455_018398
Mlig455_069528		 CG42450; RGS6; Rgs6 Regulator of G-protein signalling DHEX domain Details
16. MligTC455_40332 0.331 Mlig455_025589 Details
17. MligTC455_04611 0.329 Mlig455_028748 RFESD; Rfesd Rieske Details
18. MligTC455_42663 0.321 Mlig455_037730 Details
19. MligTC455_40911 0.32 Mlig455_036574 Details
20. MligTC455_40333 0.319 Mlig455_060618 Details
21. MligTC455_31104 0.311 Mlig455_040032
Mlig455_070983		 SYT17; Syt17; Syt4 C2 domain Details
22. MligTC455_50253 0.31 Mlig455_031495 GABRB2; Gabrb2; GluClalpha Neurotransmitter-gated ion-channel transmembrane region Details
23. MligTC455_39956 0.309 Mlig455_038145 ADGB; Adgb Calpain family cysteine protease Details

Similar genes by variation

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
Berezikov Lab - 2021 © ERIBA