M. lignano Single Cells
Mlig455
transcriptome Search Clusters Lineages Gates Plates Cells Vs. Smed Download

MligTC455_17859 (RTL1)

Mlig455 TC Mlig455 genes Homologs Pfam Full annotation
MligTC455_17859 Mlig455_020878 RTL1 Reverse transcriptase (RNA-dependent DNA polymerase) Mlig455_020878:
{Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=119.1]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=100.9]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=90.1]; Integrase zinc binding domain [PF17921.3, score=27.5]; Viral RNA-dependent RNA polymerase [PF00680.22, score=20.2]}
{Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=88.6, Expect=5e-17]}
{Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=243, Expect=3e-69]}

Links: Tomoseq.

Expression, Z-scaled

Variance, Z-scaled

Clusters

Expression, raw

Similar genes by expression

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
1. MligTC455_07262 0.707 Mlig455_026824 Details
2. MligTC455_03920 0.707 Mlig455_028871 Details
3. MligTC455_14715 0.707 Mlig455_043609 ANGPTL1; Angptl1; CG8642 Fibrinogen beta and gamma chains, C-terminal globular domain Details
4. MligTC455_07959 0.707 Mlig455_046512 SDA1 Details
5. MligTC455_29306 0.707 Mlig455_060613 Reverse transcriptase (RNA-dependent DNA polymerase) Details
6. MligTC455_14882 0.707 Mlig455_061733 CALML3; Calml3; azot EF hand Details
7. MligTC455_50810 0.5 Mlig455_011345 G-protein alpha subunit Details
8. MligTC455_00308 0.5 Mlig455_015810 Details
9. MligTC455_03783 0.5 Mlig455_016031 Details
10. MligTC455_31663 0.471 Mlig455_013845 Details
11. MligTC455_39318 0.43 Mlig455_066540 Glycosyltransferase sugar-binding region containing DXD motif Details
12. MligTC455_41917 0.408 Mlig455_001438 Details
13. MligTC455_01266 0.408 Mlig455_006668 Details
14. MligTC455_25514 0.408 Mlig455_032472 DnaJ domain Details
15. MligTC455_01739 0.408 Mlig455_046316 Glycine rich protein Details
16. MligTC455_25478 0.408 Mlig455_050831 Glypican Details
17. MligTC455_23798 0.377 Mlig455_014701 Anaphase-promoting complex subunit 4 WD40 domain Details
18. MligTC455_25745 0.372 Mlig455_050707 POLD4; Pold4 DNA polymerase delta, subunit 4 Details
19. MligTC455_24529 0.363 Mlig455_059694 Lectin C-type domain Details
20. MligTC455_53836 0.353 Mlig455_006873 GABA-B-R2; GABBR2; Gabbr2 7 transmembrane sweet-taste receptor of 3 GCPR Details
21. MligTC455_18899 0.353 Mlig455_022106 F5/8 type C domain Details
22. MligTC455_36400 0.353 Mlig455_022392 KREMEN2 WSC domain Details
23. MligTC455_25513 0.353 Mlig455_032454 DnaJ domain Details
24. MligTC455_33709 0.353 Mlig455_034860 RNase H-like domain found in reverse transcriptase Details
25. MligTC455_09788 0.353 Mlig455_035164 Asic5; SCNN1B Amiloride-sensitive sodium channel Details
26. MligTC455_04537 0.353 Mlig455_043009 RNase H Details
27. MligTC455_00178 0.353 Mlig455_043049 Details
28. MligTC455_14779 0.353 Mlig455_050522 Details
29. MligTC455_36567 0.353 Mlig455_065030 Details
30. MligTC455_57577 0.332 Mlig455_028035 Details
31. MligTC455_12442 0.322 Mlig455_066542 Details
32. MligTC455_05354 0.316 Mlig455_007241 Domain of unknown function (DUF4081) Details
33. MligTC455_09724 0.315 Mlig455_009261 Details
34. MligTC455_32790 0.315 Mlig455_010841 Wnt and FGF inhibitory regulator Details
35. MligTC455_24652 0.315 Mlig455_044910 Details
36. MligTC455_30520 0.315 Mlig455_062518 RNase H-like domain found in reverse transcriptase Details
37. MligTC455_12445 0.31 Mlig455_044145 Details
38. MligTC455_38173 0.305 Mlig455_041306 DNAH17; Dhc93AB; Dnah17 Dynein heavy chain C-terminal domain Details
39. MligTC455_21947 0.3 Mlig455_018227 CDH24; CadN2; Celsr3 EGF-like domain Details
40. MligTC455_50828 0.3 Mlig455_037962 WSCD2; Wscd2; oxt WSC domain Details

Similar genes by variation

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
Berezikov Lab - 2021 © ERIBA