M. lignano Single Cells
Mlig455
transcriptome Search Clusters Lineages Gates Plates Cells Vs. Smed Download

MligTC455_45892 (Chrna3)

Mlig455 TC Mlig455 genes Homologs Pfam Full annotation
MligTC455_45892 Mlig455_024234 Chrna3; HTR3A; nAChRalpha7 Neurotransmitter-gated ion-channel ligand binding domain Mlig455_024234:
{Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=107.1]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=73.5]}
{Human: ENSG00000166736, HTR3A, 5-hydroxytryptamine receptor 3A, [Score=139, Expect=6e-36]; ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=137, Expect=3e-35]; ENSG00000147432, CHRNB3, cholinergic receptor nicotinic beta 3 subunit, [Score=135, Expect=1e-34]}
{Mouse: ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=137, Expect=1e-35]; ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=136, Expect=4e-35]; ENSMUSG00000031492, Chrnb3, cholinergic receptor, nicotinic, beta polypeptide 3, [Score=134, Expect=2e-34]}
{Dmel: FBgn0086778, nAChRalpha7, nicotinic Acetylcholine Receptor alpha7, [Score=122, Expect=5e-30]}
{Celegans: WBGene00000048, acr-9, AcetylCholine Receptor, [Score=140, Expect=2e-36]}
{Smed: dd_Smed_v6_12182_0_1, dd_Smed_v6_12182_0_1, [Score=130, Expect=3e-33]}

Links: Tomoseq.

Expression, Z-scaled

Variance, Z-scaled

Clusters

Expression, raw

Similar genes by expression

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
1. MligTC455_13718 0.416 Mlig455_010908 Details
2. MligTC455_57614 0.416 Mlig455_029829 Details
3. MligTC455_36974 0.416 Mlig455_034466 shot Details
4. MligTC455_01462 0.416 Mlig455_043528 Details
5. MligTC455_55490 0.416 Mlig455_058627 Transposase Details
6. MligTC455_55600 0.392 Mlig455_054240 Reverse transcriptase (RNA-dependent DNA polymerase) Details
7. MligTC455_01363 0.391 Mlig455_035270 Inx5 Innexin Details
8. MligTC455_17199 0.391 Mlig455_060855 Details
9. MligTC455_18766 0.37 Mlig455_049160 Details
10. MligTC455_01193 0.37 Mlig455_057147 Details
11. MligTC455_08080 0.361 Mlig455_065831 Details
12. MligTC455_57486 0.351 Mlig455_002386 Protein of unknown function (DUF1241) Details
13. MligTC455_00653 0.338 Mlig455_028955 Details
14. MligTC455_56232 0.334 Mlig455_070062 Details
15. MligTC455_34061 0.31 Mlig455_051515 Details

Similar genes by variation

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
Berezikov Lab - 2021 © ERIBA