M. lignano Single Cells
Mlig455
transcriptome Search Clusters Lineages Gates Plates Cells Vs. Smed Download

MligTC455_39036 (MID1)

Mlig455 TC Mlig455 genes Homologs Pfam Full annotation
MligTC455_39036 Mlig455_025027 MID1; Mid1; tn Zinc finger, C3HC4 type (RING finger) Mlig455_025027:
{TRANSSPLICED}
{Pfam: Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=38.7]; RING-type zinc-finger [PF13445.8, score=36.6]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=36.0]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=33.1]; zinc-RING finger domain [PF14634.8, score=28.8]; Ring finger domain [PF13639.8, score=28.7]; zinc finger of C3HC4-type, RING [PF15227.8, score=28.5]; Prokaryotic RING finger family 4 [PF14447.8, score=23.7]; U-box domain [PF04564.17, score=21.4]; B-box zinc finger [PF00643.26, score=21.1]}
{Human: ENSG00000101871, MID1, midline 1, [RH, Score=80.9, Expect=3e-15]}
{Mouse: ENSMUSG00000035299, Mid1, midline 1, [Score=83.2, Expect=5e-16]; ENSMUSG00000000266, Mid2, midline 2, [Score=82.4, Expect=9e-16]}
{Dmel: FBgn0265356, tn, thin, [Score=54.7, Expect=3e-07]}
{Celegans: WBGene00016539, madd-2, [Score=63.9, Expect=3e-10]}
{Smed: dd_Smed_v6_6290_0_1, dd_Smed_v6_6290_0_1, [Score=56.6, Expect=3e-08]}

Links: Tomoseq.

Expression, Z-scaled

Variance, Z-scaled

Clusters

Expression, raw

Similar genes by expression

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
1. MligTC455_35126 0.32 Mlig455_013356 Details
2. MligTC455_21250 0.318 Mlig455_053283 Reverse transcriptase (RNA-dependent DNA polymerase) Details
3. MligTC455_23224 0.316 Mlig455_024528 ogre Innexin Details
4. MligTC455_21245 0.313 Mlig455_007282 SAP domain Details
5. MligTC455_00413 0.301 Mlig455_018719 Reverse transcriptase (RNA-dependent DNA polymerase) Details
6. MligTC455_22095 0.301 Mlig455_036328 FOXK1; FoxK; Foxk1 Forkhead domain Details (TF)
7. MligTC455_27978 0.301 Mlig455_037005 NYNRIN; Rtl1 RNase H-like domain found in reverse transcriptase Details
8. MligTC455_24418 0.301 Mlig455_043094 Details
9. MligTC455_35444 0.301 Mlig455_052986 RNase H-like domain found in reverse transcriptase Details
10. MligTC455_14255 0.301 Mlig455_068790 Helitron helicase-like domain at N-terminus Details

Similar genes by variation

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
Berezikov Lab - 2021 © ERIBA