M. lignano Single Cells
Mlig455
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MligTC455_04810 (GABRB3)

Mlig455 TC Mlig455 genes Homologs Pfam Full annotation
MligTC455_04810 Mlig455_034345
Mlig455_034399		 GABRB3; GLRA4; Gabrb3; Lcch3; ort Neurotransmitter-gated ion-channel ligand binding domain Mlig455_034345:
{Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=38.1]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=18.8]}
{Human: ENSG00000188828, GLRA4, glycine receptor alpha 4, [Score=60.1, Expect=4e-09]; ENSG00000166206, GABRB3, gamma-aminobutyric acid type A receptor beta3 subunit, [Score=59.7, Expect=6e-09]; ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=59.7, Expect=6e-09]; ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=57.8, Expect=2e-08]}
{Mouse: ENSMUSG00000033676, Gabrb3, gamma-aminobutyric acid (GABA) A receptor, subunit beta 3, [Score=59.7, Expect=4e-09]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=59.3, Expect=6e-09]; ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=58.2, Expect=1e-08]; ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=57.8, Expect=2e-08]; ENSMUSG00000007653, Gabrb2, gamma-aminobutyric acid (GABA) A receptor, subunit beta 2, [Score=57.4, Expect=2e-08]}
{Dmel: FBgn0010240, Lcch3, Ligand-gated chloride channel homolog 3, [Score=53.1, Expect=3e-07]}
{Celegans: WBGene00015412, lgc-9, Ligand-Gated ion Channel, [Score=60.8, Expect=9e-10]}
{Smed: dd_Smed_v6_14925_0_1, dd_Smed_v6_14925_0_1, [RH, Score=597, Expect=0.0]}

Mlig455_034399:
{Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=37.5]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=18.8]}
{Human: ENSG00000166206, GABRB3, gamma-aminobutyric acid type A receptor beta3 subunit, [Score=60.1, Expect=5e-09]; ENSG00000188828, GLRA4, glycine receptor alpha 4, [Score=60.1, Expect=3e-09]; ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=57.8, Expect=2e-08]; ENSG00000145864, GABRB2, gamma-aminobutyric acid type A receptor beta2 subunit, [Score=57.4, Expect=3e-08]}
{Mouse: ENSMUSG00000033676, Gabrb3, gamma-aminobutyric acid (GABA) A receptor, subunit beta 3, [Score=59.7, Expect=4e-09]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=59.3, Expect=6e-09]; ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=58.2, Expect=1e-08]; ENSMUSG00000007653, Gabrb2, gamma-aminobutyric acid (GABA) A receptor, subunit beta 2, [Score=57.4, Expect=2e-08]; ENSMUSG00000029212, Gabrb1, gamma-aminobutyric acid (GABA) A receptor, subunit beta 1, [Score=57.0, Expect=3e-08]}
{Dmel: FBgn0003011, ort, ora transientless, [Score=53.5, Expect=2e-07]}
{Celegans: WBGene00015412, lgc-9, Ligand-Gated ion Channel, [Score=59.7, Expect=2e-09]}
{Smed: dd_Smed_v6_14925_0_1, dd_Smed_v6_14925_0_1, [RH, Score=600, Expect=0.0]}

Links: Tomoseq.

Expression, Z-scaled

Variance, Z-scaled

Clusters

Expression, raw

Similar genes by expression

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
1. MligTC455_04811 1.0 Mlig455_050083 GLRA4; Glra4; Lcch3 Neurotransmitter-gated ion-channel ligand binding domain Details
2. MligTC455_13347 0.707 Mlig455_024066 Glycosyltransferase sugar-binding region containing DXD motif Details
3. MligTC455_06146 0.577 Mlig455_063968 ANK3; Ank3; Patsas Ankyrin repeats (3 copies) Details
4. MligTC455_08282 0.5 Mlig455_034094 MYH2; Mhc; Myh13 Myosin tail Details
5. MligTC455_00382 0.5 Mlig455_039718 Details
6. MligTC455_51559 0.491 Mlig455_002923
Mlig455_002941		 Details
7. MligTC455_17942 0.447 Mlig455_036187
Mlig455_036194		 Details
8. MligTC455_13957 0.408 Mlig455_016737 ADGRV1; Adgrv1; Calx Calx-beta domain Details
9. MligTC455_53098 0.374 Mlig455_000210 Details
10. MligTC455_24272 0.374 Mlig455_005121
Mlig455_005189		 CHRNA7; Chrna7; nAChRalpha2 Neurotransmitter-gated ion-channel ligand binding domain Details
11. MligTC455_45712 0.357 Mlig455_050761
Mlig455_050791		 Details
12. MligTC455_53741 0.355 Mlig455_014136 Mgat1; POMGNT1; Pomgnt1 GNT-I family Details
13. MligTC455_10672 0.353 Mlig455_047046 POGZ; Pogz; row CIDE-N domain Details
14. MligTC455_15015 0.325 Mlig455_007568 LHX3; Lhx3; Lim3 LIM domain Details (TF)
15. MligTC455_10870 0.324 Mlig455_060384 NAGS; Nags NAT, N-acetyltransferase, of N-acetylglutamate synthase Details
16. MligTC455_21766 0.323 Mlig455_005055 Details
17. MligTC455_33871 0.316 Mlig455_026131
Mlig455_026203		 P2RX4; P2rx4 ATP P2X receptor Details
18. MligTC455_18144 0.308 Mlig455_003499 P2RX4; P2rx4 ATP P2X receptor Details
19. MligTC455_13832 0.308 Mlig455_065431 Details
20. MligTC455_28286 0.302 Mlig455_023537 Details

Similar genes by variation

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
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