M. lignano Single Cells
Mlig455
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MligTC455_34107

Mlig455 TC Mlig455 genes Homologs Pfam Full annotation
MligTC455_34107 Mlig455_007756
Mlig455_036623
Mlig455_058157		 RNase H-like domain found in reverse transcriptase Mlig455_007756:
{Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=113.9]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=112.3]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=91.1]; Integrase zinc binding domain [PF17921.3, score=67.7]; Integrase core domain [PF00665.28, score=45.7]; H2C2 zinc finger [PF09337.12, score=29.1]}
{Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [RH, Score=382, Expect=4e-120]}

Mlig455_036623:
{Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=113.8]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=112.2]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=91.9]; Integrase zinc binding domain [PF17921.3, score=67.5]; Integrase core domain [PF00665.28, score=45.5]; H2C2 zinc finger [PF09337.12, score=29.0]; gag-polyprotein putative aspartyl protease [PF13975.8, score=26.5]; Aspartyl protease [PF13650.8, score=22.7]; Retroviral aspartyl protease [PF00077.22, score=19.9]}
{Smed: dd_Smed_v6_1574_6_38, dd_Smed_v6_1574_6_38, [RH, Score=382, Expect=7e-119]}

Mlig455_058157:
{Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=113.4]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=111.7]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=90.9]; Integrase zinc binding domain [PF17921.3, score=64.2]; Integrase core domain [PF00665.28, score=45.0]; gag-polyprotein putative aspartyl protease [PF13975.8, score=28.6]; H2C2 zinc finger [PF09337.12, score=28.1]; Aspartyl protease [PF13650.8, score=23.6]; Retroviral aspartyl protease [PF00077.22, score=19.0]}
{Smed: dd_Smed_v6_1574_6_38, dd_Smed_v6_1574_6_38, [RH, Score=379, Expect=1e-115]}

Links: Tomoseq.

Expression, Z-scaled

Variance, Z-scaled

Clusters

Expression, raw

Similar genes by expression

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
1. MligTC455_34101 0.771 Mlig455_006326 RNase H-like domain found in reverse transcriptase Details
2. MligTC455_34100 0.635 Mlig455_000058 RNase H-like domain found in reverse transcriptase Details
3. MligTC455_34109 0.335 Mlig455_036207
Mlig455_060306
Mlig455_064034
Mlig455_064415		 NYNRIN; Nynrin Integrase core domain;
Integrase zinc binding domain;
RNase H-like domain found in reverse transcriptase		 Details
4. MligTC455_34102 0.333 Mlig455_057621 RNase H-like domain found in reverse transcriptase Details
5. MligTC455_55975 0.305 Mlig455_004672 TRPC6; Trpc7; Trpgamma Transient receptor ion channel II Details
6. MligTC455_15865 0.305 Mlig455_004735 TRPC5; Trpc5; Trpgamma Transient receptor ion channel II Details
7. MligTC455_15866 0.305 Mlig455_004835 TRPC5; Trpc5; Trpgamma Transient receptor ion channel II Details
8. MligTC455_04225 0.305 Mlig455_006275 RNase H-like domain found in reverse transcriptase Details
9. MligTC455_24423 0.305 Mlig455_014164 Ankrd65; KIDINS220; mask Ankyrin repeats (3 copies) Details
10. MligTC455_57657 0.305 Mlig455_023044 Details
11. MligTC455_11672 0.305 Mlig455_042449 KREMEN1; Kremen1 WSC domain Details

Similar genes by variation

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
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