M. lignano Single Cells
Mlig455
transcriptome Search Clusters Lineages Gates Plates Cells Vs. Smed Download

MligTC455_41436 (PCDHA1)

Mlig455 TC Mlig455 genes Homologs Pfam Full annotation
MligTC455_41436 Mlig455_038820
Mlig455_038831
Mlig455_038905		 PCDHA1; Pcdh1; Pcdhgb4; ds; stan Cadherin domain Mlig455_038820:
{Pfam: Cadherin domain [PF00028.19, score=219.7]; Cadherin-like [PF16184.7, score=28.8]; Cadherin-like [PF08266.14, score=20.3]}
{Human: ENSG00000204970, PCDHA1, protocadherin alpha 1, [Score=229, Expect=3e-61]; ENSG00000156453, PCDH1, protocadherin 1, [Score=223, Expect=6e-59]; ENSG00000253953, PCDHGB4, protocadherin gamma subfamily B, 4, [Score=218, Expect=9e-58]}
{Mouse: ENSMUSG00000103585, Pcdhgb4, protocadherin gamma subfamily B, 4, [Score=227, Expect=5e-61]; ENSMUSG00000051375, Pcdh1, protocadherin 1, [Score=225, Expect=5e-60]; ENSMUSG00000103749, Pcdhgb5, protocadherin gamma subfamily B, 5, [Score=225, Expect=2e-60]; ENSMUSG00000104063, Pcdhgb7, protocadherin gamma subfamily B, 7, [Score=217, Expect=1e-57]; ENSMUSG00000103442, Pcdha1, protocadherin alpha 1, [Score=216, Expect=2e-57]}
{Dmel: FBgn0284247, ds, dachsous, [Score=180, Expect=2e-45]}
{Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=133, Expect=5e-31]}
{Smed: dd_Smed_v6_13040_0_1, dd_Smed_v6_13040_0_1, [RH, Score=379, Expect=7e-114]}

Mlig455_038831:
{Pfam: Cadherin domain [PF00028.19, score=208.3]; Cadherin-like [PF16184.7, score=26.1]; Cadherin-like [PF08266.14, score=18.5]}
{Human: ENSG00000204970, PCDHA1, protocadherin alpha 1, [Score=209, Expect=8e-55]; ENSG00000156453, PCDH1, protocadherin 1, [Score=205, Expect=3e-53]; ENSG00000253953, PCDHGB4, protocadherin gamma subfamily B, 4, [Score=199, Expect=9e-52]; ENSG00000253910, PCDHGB2, protocadherin gamma subfamily B, 2, [Score=199, Expect=6e-52]}
{Mouse: ENSMUSG00000051375, Pcdh1, protocadherin 1, [Score=208, Expect=1e-54]; ENSMUSG00000103749, Pcdhgb5, protocadherin gamma subfamily B, 5, [Score=202, Expect=4e-53]; ENSMUSG00000103585, Pcdhgb4, protocadherin gamma subfamily B, 4, [Score=201, Expect=2e-52]}
{Dmel: FBgn0024836, stan, starry night, [Score=161, Expect=1e-39]}
{Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=130, Expect=3e-30]}
{Smed: dd_Smed_v6_13040_0_1, dd_Smed_v6_13040_0_1, [Score=352, Expect=5e-104]}

Mlig455_038905:
{Pfam: Cadherin domain [PF00028.19, score=220.4]; Cadherin-like [PF16184.7, score=28.3]}
{Human: ENSG00000204970, PCDHA1, protocadherin alpha 1, [Score=230, Expect=2e-62]; ENSG00000156453, PCDH1, protocadherin 1, [Score=225, Expect=2e-59]}
{Mouse: ENSMUSG00000051375, Pcdh1, protocadherin 1, [Score=227, Expect=2e-60]; ENSMUSG00000103749, Pcdhgb5, protocadherin gamma subfamily B, 5, [Score=224, Expect=3e-60]; ENSMUSG00000103585, Pcdhgb4, protocadherin gamma subfamily B, 4, [Score=223, Expect=6e-60]}
{Dmel: FBgn0284247, ds, dachsous, [Score=182, Expect=7e-46]}
{Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=151, Expect=1e-36]}
{Smed: dd_Smed_v6_13040_0_1, dd_Smed_v6_13040_0_1, [RH, Score=377, Expect=5e-113]}

Links: Tomoseq.

Expression, Z-scaled

Variance, Z-scaled

Clusters

Expression, raw

Similar genes by expression

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
1. MligTC455_08012 0.343 Mlig455_012875 Details
2. MligTC455_15125 0.343 Mlig455_017752 IGSF9; Igsf9; tutl Immunoglobulin domain Details
3. MligTC455_03171 0.343 Mlig455_033541 Details
4. MligTC455_18178 0.343 Mlig455_047521 Details
5. MligTC455_55381 0.343 Mlig455_050650 REJ domain Details
6. MligTC455_25196 0.343 Mlig455_057373 Hil; KY; Ky Details
7. MligTC455_47278 0.343 Mlig455_059520 Details
8. MligTC455_03276 0.343 Mlig455_062144 Details
9. MligTC455_13677 0.343 Mlig455_063944 Details

Similar genes by variation

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
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