M. lignano Single Cells
Mlig455
transcriptome Search Clusters Lineages Gates Plates Cells Vs. Smed Download

MligTC455_24042 (TRIM56)

Mlig455 TC Mlig455 genes Homologs Pfam Full annotation
MligTC455_24042 Mlig455_039683 TRIM56; Trim56; mei-P26 B-box zinc finger Mlig455_039683:
{Pfam: B-box zinc finger [PF00643.26, score=45.9]; RING-type zinc-finger [PF13445.8, score=33.5]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=28.3]; Ring finger domain [PF13639.8, score=23.2]; zinc-RING finger domain [PF14634.8, score=22.7]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=21.8]; Protein of unknown function (DUF3583) [PF12126.10, score=19.9]}
{Human: ENSG00000169871, TRIM56, tripartite motif containing 56, [RH, Score=126, Expect=9e-30]}
{Mouse: ENSMUSG00000043279, Trim56, tripartite motif-containing 56, [RH, Score=121, Expect=2e-28]}
{Dmel: FBgn0026206, mei-P26, meiotic P26, [Score=105, Expect=2e-23]}
{Smed: dd_Smed_v6_8395_0_1, dd_Smed_v6_8395_0_1, [RH, Score=410, Expect=5e-137]}

Links: Tomoseq.

Expression, Z-scaled

Variance, Z-scaled

Clusters

Expression, raw

Similar genes by expression

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
1. MligTC455_48420 0.4 Mlig455_045240
Mlig455_069159		 Details
2. MligTC455_39468 0.39 Mlig455_035437 CALM2; Calm1; Cam EF-hand domain pair Details
3. MligTC455_47247 0.384 Mlig455_027432 CG4984 Details
4. MligTC455_47310 0.384 Mlig455_043391
Mlig455_043398
Mlig455_043415
Mlig455_043558
Mlig455_043566		 Details
5. MligTC455_39469 0.383 Mlig455_061088 CALML3; Tnnc2; TpnC47D EF-hand domain pair Details
6. MligTC455_45271 0.382 Mlig455_064813 TNNT2; Tnnt3; up Troponin Details
7. MligTC455_51084 0.381 Mlig455_023014
Mlig455_023114		 PDLIM7; Pdlim7; Zasp52 LIM domain Details
8. MligTC455_24043 0.381 Mlig455_039739 TRIM56; Trim56; mei-P26 B-box zinc finger Details
9. MligTC455_35392 0.376 Mlig455_067668 TPM1; Tm2; Tpm1 Tropomyosin Details
10. MligTC455_06911 0.375 Mlig455_017250 LDB3; Synpo2l; Zasp52 PDZ domain Details
11. MligTC455_20860 0.371 Mlig455_012001 AC154187.2; MYL12B; sqh EF-hand domain pair Details
12. MligTC455_45270 0.37 Mlig455_034550 TNNT3; Tnnt3; up Troponin Details
13. MligTC455_15900 0.369 Mlig455_031571 AK1; Adk1; Ak1 Adenylate kinase Details
14. MligTC455_20859 0.368 Mlig455_011992 MYL12B; Myl12b; sqh EF-hand domain pair Details
15. MligTC455_20952 0.367 Mlig455_007960
Mlig455_008105
Mlig455_015591		 COL24A1; Col1a2; Col27a1; Col4a1 Collagen triple helix repeat (20 copies) Details
16. MligTC455_32198 0.367 Mlig455_022768 FAT1; Lrp1b; N Laminin G domain Details
17. MligTC455_34282 0.367 Mlig455_058016
Mlig455_058207		 CSRP2; Csrp2; Mlp84B LIM domain Details
18. MligTC455_34281 0.36 Mlig455_058179 CSRP2; Csrp2; Mlp84B LIM domain Details
19. MligTC455_34643 0.348 Mlig455_063315 ATP2A2; Atp2a2; SERCA E1-E2 ATPase Details
20. MligTC455_49197 0.345 Mlig455_049307
Mlig455_050644		 SPOPL; Tdpoz4; rdx BTB/POZ domain Details
21. MligTC455_48743 0.329 Mlig455_019063 CG14207 Hsp20/alpha crystallin family Details
22. MligTC455_50212 0.329 Mlig455_039258
Mlig455_039283		 ASGR1; Gm156 Lectin C-type domain Details
23. MligTC455_33144 0.329 Mlig455_040574
Mlig455_062061		 NPHS1; Ncam2; hbs Immunoglobulin domain Details
24. MligTC455_48744 0.329 Mlig455_064307
Mlig455_064340		 CG14207 Hsp20/alpha crystallin family Details
25. MligTC455_44313 0.328 Mlig455_004707 MYL4; Mlc1; Myl6b EF-hand domain Details
26. MligTC455_45053 0.328 Mlig455_016954
Mlig455_017042		 COL24A1; Col1a2; Col4a1 Collagen triple helix repeat (20 copies) Details
27. MligTC455_50213 0.327 Mlig455_054495 ASGR1; Gm156 Lectin C-type domain Details
28. MligTC455_43376 0.325 Mlig455_003642 COL24A1; Col1a2; Col4a1 Collagen triple helix repeat (20 copies) Details
29. MligTC455_29301 0.325 Mlig455_063822 MYH6; Mhc; Myh6 Myosin head (motor domain) Details
30. MligTC455_49830 0.323 Mlig455_031215 CG9297; Ttn Details
31. MligTC455_29302 0.319 Mlig455_069986 MYH2; Mhc; Myh4 Myosin tail Details
32. MligTC455_48596 0.318 Mlig455_017750 LIMA1; Lima1; Mlp60A LIM domain Details
33. MligTC455_50015 0.316 Mlig455_019671 Details
34. MligTC455_46393 0.314 Mlig455_065811 CNN3; Cnn3; Mp20 Calponin homology (CH) domain Details
35. MligTC455_24452 0.311 Mlig455_001252
Mlig455_034610		 TTN; Ttn; bt Fibronectin type III domain;
Immunoglobulin I-set domain		 Details
36. MligTC455_50277 0.311 Mlig455_036476
Mlig455_056261		 TNNI2; Tnni2; wupA Troponin Details
37. MligTC455_37227 0.31 Mlig455_057463 COL24A1; Col4a1; Col5a3 Collagen triple helix repeat (20 copies) Details
38. MligTC455_17606 0.31 Mlig455_059796 TPM1; Tm1; Tpm1 Tropomyosin Details
39. MligTC455_24727 0.309 Mlig455_035829 CBP EF-hand domain pair Details
40. MligTC455_48689 0.307 Mlig455_054292
Mlig455_054368		 MYL6B; Mlc1; Myl6b EF-hand domain Details
41. MligTC455_25557 0.304 Mlig455_049582 CG10011; TRPM3; Trpm3 Ankyrin repeats (3 copies) Details
42. MligTC455_30813 0.302 Mlig455_002432 CG45049 PMP-22/EMP/MP20/Claudin family Details
43. MligTC455_47246 0.302 Mlig455_027426 CG4984 Details
44. MligTC455_17976 0.301 Mlig455_002059 Details
45. MligTC455_23759 0.301 Mlig455_010435 CNN2; Cnn2; Mp20 Calponin family repeat Details
46. MligTC455_44314 0.301 Mlig455_064778 MYL6B; Mlc1; Myl6b EF-hand domain Details
47. MligTC455_40708 0.301 Mlig455_067130 Details

Similar genes by variation

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
Berezikov Lab - 2021 © ERIBA