M. lignano Single Cells
Mlig455
transcriptome Search Clusters Lineages Gates Plates Cells Vs. Smed Download

MligTC455_27669 (PIF1)

Mlig455 TC Mlig455 genes Homologs Pfam Full annotation
MligTC455_27669 Mlig455_032312
Mlig455_032621
Mlig455_042915		 PIF1; Pif1 OTU-like cysteine protease;
PIF1-like helicase		 Mlig455_032312:
{Pfam: PIF1-like helicase [PF05970.16, score=27.1]; ATP-dependent RecD-like DNA helicase SH3 domain [PF18335.3, score=21.7]}

Mlig455_032621:
{Pfam: OTU-like cysteine protease [PF02338.21, score=23.4]; PIF1-like helicase [PF05970.16, score=22.2]; ATP-dependent RecD-like DNA helicase SH3 domain [PF18335.3, score=18.4]; Peptidase C65 Otubain [PF10275.11, score=18.2]}

Mlig455_042915:
{Pfam: OTU-like cysteine protease [PF02338.21, score=23.3]; PIF1-like helicase [PF05970.16, score=22.0]; Peptidase C65 Otubain [PF10275.11, score=18.0]}
{Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=66.2, Expect=1e-10]}
{Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=67.0, Expect=5e-11]}
{Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=63.5, Expect=4e-10]}
{Celegans: WBGene00004028, pif-1, ATP-dependent DNA helicase PIF1, [Score=61.6, Expect=7e-10]}
{Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=53.1, Expect=4e-07]}

Links: Tomoseq.

Expression, Z-scaled

Variance, Z-scaled

Clusters

Expression, raw

Similar genes by expression

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
1. MligTC455_02448 0.542 Mlig455_028195 Slc22a7 Details
2. MligTC455_57001 0.542 Mlig455_032465 Transposase Details
3. MligTC455_01521 0.542 Mlig455_055843 Transposase (partial DDE domain) Details
4. MligTC455_31192 0.542 Mlig455_071108 RNase H-like domain found in reverse transcriptase Details
5. MligTC455_46789 0.404 Mlig455_063762 AMD1; Amd2; SamDC Adenosylmethionine decarboxylase Details
6. MligTC455_09699 0.383 Mlig455_007615 Details
7. MligTC455_07852 0.383 Mlig455_010426 Details
8. MligTC455_24589 0.383 Mlig455_016356 Details
9. MligTC455_20764 0.383 Mlig455_018277 CG13248; SLC7A4; Slc7a4 Amino acid permease Details
10. MligTC455_05307 0.383 Mlig455_033612 SOX2; Sox2; Sox21a HMG (high mobility group) box Details (TF)
11. MligTC455_54698 0.383 Mlig455_035839 Details
12. MligTC455_15281 0.383 Mlig455_043549 Details
13. MligTC455_57126 0.383 Mlig455_045763 Details
14. MligTC455_02307 0.342 Mlig455_055731 Tor1a Torsin Details
15. MligTC455_36914 0.33 Mlig455_005095 CASKIN2; CG11168; Caskin1 Ankyrin repeats (many copies) Details
16. MligTC455_15292 0.312 Mlig455_004603 Details
17. MligTC455_09529 0.312 Mlig455_021548 Details
18. MligTC455_54677 0.312 Mlig455_025338 SETMAR Transposase (partial DDE domain) Details
19. MligTC455_03337 0.312 Mlig455_041482 PRR9 Details
20. MligTC455_09284 0.312 Mlig455_053420 Details
21. MligTC455_11234 0.312 Mlig455_063536 Details
22. MligTC455_50102 0.312 Mlig455_011966
Mlig455_066500		 Details
23. MligTC455_35612 0.309 Mlig455_028477
Mlig455_028502		 Details

Similar genes by variation

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
Berezikov Lab - 2021 © ERIBA