M. lignano Single Cells
Mlig455
transcriptome Search Clusters Lineages Gates Plates Cells Vs. Smed Download

MligTC455_37067 (PDZ-GEF)

Mlig455 TC Mlig455 genes Homologs Pfam Full annotation
MligTC455_37067 Mlig455_030195
Mlig455_030208
Mlig455_047146
Mlig455_047224
Mlig455_055167		 PDZ-GEF; RASGRP1; RASGRP3; Rasgrp3; unc-13 EF hand;
Phorbol esters/diacylglycerol binding domain (C1 domain);
RasGEF domain		 Mlig455_030195:
{Pfam: RasGEF domain [PF00617.21, score=138.5]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=48.5]; EF hand [PF00036.34, score=41.4]; EF-hand domain [PF13405.8, score=40.5]; EF-hand domain pair [PF13499.8, score=39.2]; EF hand [PF13202.8, score=37.8]; EF-hand domain pair [PF13833.8, score=27.8]}
{Human: ENSG00000172575, RASGRP1, RAS guanyl releasing protein 1, [Score=380, Expect=3e-120]; ENSG00000152689, RASGRP3, RAS guanyl releasing protein 3, [Score=379, Expect=5e-121]}
{Mouse: ENSMUSG00000071042, Rasgrp3, RAS, guanyl releasing protein 3, [Score=379, Expect=3e-121]; ENSMUSG00000027347, Rasgrp1, RAS guanyl releasing protein 1, [Score=370, Expect=2e-116]}
{Dmel: FBgn0025726, unc-13, [Score=72.0, Expect=1e-12]}
{Celegans: WBGene00009100, rgef-1, Rap Guanine nucleotide Exchange Factor homolog, [Score=366, Expect=6e-117]}
{Smed: dd_Smed_v6_15742_0_2, dd_Smed_v6_15742_0_2, [Score=251, Expect=1e-76]}

Mlig455_030208:
{Pfam: EF hand [PF00036.34, score=24.0]; EF-hand domain [PF13405.8, score=23.6]; EF hand [PF13202.8, score=21.1]; EF-hand domain pair [PF13499.8, score=20.9]}
{Human: ENSG00000172575, RASGRP1, RAS guanyl releasing protein 1, [Score=46.6, Expect=3e-06]}
{Celegans: WBGene00009100, rgef-1, Rap Guanine nucleotide Exchange Factor homolog, [Score=52.8, Expect=7e-09]}
{Smed: dd_Smed_v6_15742_0_2, dd_Smed_v6_15742_0_2, [Score=61.2, Expect=5e-12]}

Mlig455_047146:
{Pfam: Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=52.5]; EF-hand domain [PF13405.8, score=35.6]; RasGEF domain [PF00617.21, score=34.9]; EF hand [PF00036.34, score=31.3]; EF-hand domain pair [PF13499.8, score=31.1]; EF hand [PF13202.8, score=28.0]}
{Human: ENSG00000152689, RASGRP3, RAS guanyl releasing protein 3, [Score=299, Expect=2e-94]; ENSG00000172575, RASGRP1, RAS guanyl releasing protein 1, [Score=293, Expect=2e-91]}
{Mouse: ENSMUSG00000071042, Rasgrp3, RAS, guanyl releasing protein 3, [Score=293, Expect=4e-92]; ENSMUSG00000027347, Rasgrp1, RAS guanyl releasing protein 1, [Score=281, Expect=9e-87]}
{Dmel: FBgn0025726, unc-13, [Score=70.9, Expect=1e-12]}
{Celegans: WBGene00009100, rgef-1, Rap Guanine nucleotide Exchange Factor homolog, [Score=248, Expect=1e-75]}
{Smed: dd_Smed_v6_15742_0_2, dd_Smed_v6_15742_0_2, [RH, Score=300, Expect=3e-99]}

Mlig455_047224:
{Pfam: RasGEF domain [PF00617.21, score=152.9]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=51.7]; EF-hand domain [PF13405.8, score=34.2]; EF hand [PF00036.34, score=29.6]; EF-hand domain pair [PF13499.8, score=28.8]; EF hand [PF13202.8, score=26.6]}
{Human: ENSG00000152689, RASGRP3, RAS guanyl releasing protein 3, [RH, Score=478, Expect=4e-159]}
{Mouse: ENSMUSG00000071042, Rasgrp3, RAS, guanyl releasing protein 3, [RH, Score=462, Expect=5e-153]; ENSMUSG00000027347, Rasgrp1, RAS guanyl releasing protein 1, [RH, Score=439, Expect=6e-143]}
{Dmel: FBgn0265778, PDZ-GEF, PDZ domain-containing guanine nucleotide exchange factor, [Score=96.3, Expect=6e-20]}
{Celegans: WBGene00009100, rgef-1, Rap Guanine nucleotide Exchange Factor homolog, [RH, Score=424, Expect=3e-139]}
{Smed: dd_Smed_v6_15742_0_2, dd_Smed_v6_15742_0_2, [RH, Score=299, Expect=1e-94]}

Mlig455_055167:

Links: Tomoseq.

Expression, Z-scaled

Variance, Z-scaled

Clusters

Expression, raw

Similar genes by expression

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation

Similar genes by variation

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
Berezikov Lab - 2021 © ERIBA