M. lignano Single Cells
Mlig455
transcriptome Search Clusters Lineages Gates Plates Cells Vs. Smed Download

MligTC455_35930 (CG3108)

Mlig455 TC Mlig455 genes Homologs Pfam Full annotation
MligTC455_35930 Mlig455_013588
Mlig455_020368
Mlig455_020427
Mlig455_030258
Mlig455_032612
Mlig455_035614
Mlig455_051237
Mlig455_052667
Mlig455_070378		 CG3108; NYNRIN; Nynrin; RTL1; Rtl1; Sfmbt2 RNase H-like domain found in reverse transcriptase;
Retrotransposon gag protein;
Reverse transcriptase (RNA-dependent DNA polymerase);
Zinc knuckle		 Mlig455_013588:
{Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=51.2]; Spumavirus aspartic protease (A9) [PF03539.16, score=21.2]}
{Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=181, Expect=2e-52]}

Mlig455_020368:
{Pfam: Zinc knuckle [PF00098.25, score=23.7]}

Mlig455_020427:
{Pfam: Retrotransposon gag protein [PF03732.19, score=30.7]; Zinc knuckle [PF00098.25, score=21.4]}

Mlig455_030258:
{Mouse: ENSMUSG00000061186, Sfmbt2, Scm-like with four mbt domains 2, [Score=51.6, Expect=1e-06]}
{Smed: dd_Smed_v6_1574_6_73, dd_Smed_v6_1574_6_73, [Score=99.4, Expect=4e-23]}

Mlig455_032612:
{Pfam: Retrotransposon gag protein [PF03732.19, score=30.6]; Zinc knuckle [PF00098.25, score=22.5]}

Mlig455_035614:
{Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=97.2]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=69.5]; Integrase zinc binding domain [PF17921.3, score=61.5]; Integrase core domain [PF00665.28, score=51.2]}
{Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=90.1, Expect=8e-18]}
{Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=75.9, Expect=1e-13]}
{Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [RH, Score=219, Expect=2e-64]}

Mlig455_051237:
{Mouse: ENSMUSG00000061186, Sfmbt2, Scm-like with four mbt domains 2, [Score=50.8, Expect=2e-06]}
{Smed: dd_Smed_v6_1574_6_73, dd_Smed_v6_1574_6_73, [Score=103, Expect=2e-24]}

Mlig455_052667:
{Pfam: Retrotransposon gag protein [PF03732.19, score=30.6]; Zinc knuckle [PF00098.25, score=22.5]}

Mlig455_070378:
{Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=98.7]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=98.1]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=96.4]; Integrase zinc binding domain [PF17921.3, score=62.8]; Integrase core domain [PF00665.28, score=51.7]; Spumavirus aspartic protease (A9) [PF03539.16, score=19.2]}
{Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=113, Expect=1e-24]}
{Mouse: ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=94.4, Expect=6e-19]; ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=94.4, Expect=6e-19]}
{Dmel: FBgn0029807, CG3108, [Score=61.2, Expect=5e-09]}
{Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=443, Expect=5e-138]}

Links: Tomoseq.

Expression, Z-scaled

Variance, Z-scaled

Clusters

Expression, raw

Similar genes by expression

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation

Similar genes by variation

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
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