MligTC455_54093 (Ldb3)
| Mlig455 TC | Mlig455 genes | Homologs | Pfam | Full annotation |
|---|---|---|---|---|
| MligTC455_54093 | Mlig455_019829 Mlig455_051998 |
Ldb3; SYNPO2L; Zasp52 | PDZ domain | Mlig455_019829: {Pfam: PDZ domain [PF00595.26, score=54.1]; PDZ domain [PF13180.8, score=22.6]; PDZ domain [PF17820.3, score=19.9]; Family of unknown function (DUF6288) [PF19805.1, score=18.3]} {Human: ENSG00000166317, SYNPO2L, synaptopodin 2 like, [Score=58.2, Expect=4e-10]; ENSG00000122367, LDB3, LIM domain binding 3, [Score=57.8, Expect=5e-10]} {Mouse: ENSMUSG00000021798, Ldb3, LIM domain binding 3, [Score=57.8, Expect=4e-10]; ENSMUSG00000039376, Synpo2l, synaptopodin 2-like, [Score=55.8, Expect=2e-09]} {Dmel: FBgn0265991, Zasp52, Z band alternatively spliced PDZ-motif protein 52, [Score=57.4, Expect=4e-10]} {Celegans: WBGene00010444, magi-1, MAGI (Membrane Associated Guanylate kinase Inverted) homolog, [Score=46.2, Expect=2e-06]} {Smed: dd_Smed_v6_12834_0_1, dd_Smed_v6_12834_0_1, [Score=73.2, Expect=6e-17]} Mlig455_051998: {Pfam: PDZ domain [PF00595.26, score=54.1]; PDZ domain [PF13180.8, score=22.6]; PDZ domain [PF17820.3, score=19.9]; Family of unknown function (DUF6288) [PF19805.1, score=18.3]} {Human: ENSG00000166317, SYNPO2L, synaptopodin 2 like, [Score=58.2, Expect=4e-10]; ENSG00000122367, LDB3, LIM domain binding 3, [Score=57.8, Expect=5e-10]} {Mouse: ENSMUSG00000021798, Ldb3, LIM domain binding 3, [Score=57.8, Expect=4e-10]; ENSMUSG00000039376, Synpo2l, synaptopodin 2-like, [Score=55.8, Expect=2e-09]} {Dmel: FBgn0265991, Zasp52, Z band alternatively spliced PDZ-motif protein 52, [Score=57.4, Expect=4e-10]} {Celegans: WBGene00010444, magi-1, MAGI (Membrane Associated Guanylate kinase Inverted) homolog, [Score=46.2, Expect=2e-06]} {Smed: dd_Smed_v6_12834_0_1, dd_Smed_v6_12834_0_1, [Score=73.2, Expect=6e-17]} |
Links: Tomoseq.
Expression, Z-scaled
Variance, Z-scaled
Clusters
Expression, raw
Similar genes by expression
| Nr. | Mlig455 TC | Pearson corr. | Mlig455 genes | Homologs | Pfam | Full annotation |
|---|---|---|---|---|---|---|
| 1. | MligTC455_43096 | 0.515 | Mlig455_019855 | PDZ domain | Details | |
| 2. | MligTC455_56811 | 0.387 | Mlig455_004514 | AHNAK2; Tro | Details | |
| 3. | MligTC455_12251 | 0.387 | Mlig455_016301 | Reverse transcriptase (RNA-dependent DNA polymerase) | Details | |
| 4. | MligTC455_05246 | 0.373 | Mlig455_032595 | Ribosomal protein S31e | Details | |
| 5. | MligTC455_25128 | 0.365 | Mlig455_037046 | Ank; Asb3; GPR75-ASB3 | Ankyrin repeats (3 copies) | Details |
| 6. | MligTC455_18540 | 0.364 | Mlig455_003235 | SFRP2; Sfrp2; fz4 | Fz domain | Details |
| 7. | MligTC455_39365 | 0.36 | Mlig455_017196 | 7 transmembrane receptor (rhodopsin family) | Details | |
| 8. | MligTC455_29960 | 0.352 | Mlig455_023336 | ANGPTL2; Angptl2; CG8642 | Fibrinogen beta and gamma chains, C-terminal globular domain | Details |
| 9. | MligTC455_49963 | 0.351 | Mlig455_023960 | AGRN; Agrn; CG32354 | Kazal-type serine protease inhibitor domain | Details |
| 10. | MligTC455_45053 | 0.349 | Mlig455_016954 Mlig455_017042 |
COL24A1; Col1a2; Col4a1 | Collagen triple helix repeat (20 copies) | Details |
| 11. | MligTC455_54351 | 0.345 | Mlig455_008965 | PLAC8 | PLAC8 family | Details |
| 12. | MligTC455_29965 | 0.343 | Mlig455_046945 | ANGPT4; Angpt4; CG31832 | Fibrinogen beta and gamma chains, C-terminal globular domain | Details |
| 13. | MligTC455_18539 | 0.33 | Mlig455_003030 | SFRP2; Sfrp2; fz4 | Fz domain | Details |
| 14. | MligTC455_56910 | 0.327 | Mlig455_053760 | Details | ||
| 15. | MligTC455_38382 | 0.318 | Mlig455_061731 | LAMA5; Lama5; LanA | Laminin EGF domain | Details |
| 16. | MligTC455_48420 | 0.317 | Mlig455_045240 Mlig455_069159 |
Details | ||
| 17. | MligTC455_18541 | 0.314 | Mlig455_003326 | SFRP2; Sfrp2; fz4 | Fz domain | Details |
| 18. | MligTC455_48597 | 0.314 | Mlig455_053761 | LIMA1; Lima1; Mlp60A | LIM domain | Details |
| 19. | MligTC455_29961 | 0.31 | Mlig455_023343 | ANGPTL7; Angptl7; CG5550 | Fibrinogen beta and gamma chains, C-terminal globular domain | Details |
| 20. | MligTC455_44424 | 0.31 | Mlig455_065094 | CLK2; Clk2; Doa | Protein kinase domain | Details |
| 21. | MligTC455_29350 | 0.308 | Mlig455_007352 | Details | ||
| 22. | MligTC455_25127 | 0.308 | Mlig455_009251 | Ank; Asb3; GPR75-ASB3 | Ankyrin repeats (3 copies) | Details |
| 23. | MligTC455_25129 | 0.308 | Mlig455_009262 | Ank; Asb3; GPR75-ASB3 | Ankyrin repeats (3 copies) | Details |
| 24. | MligTC455_29351 | 0.302 | Mlig455_066669 | Details |
Similar genes by variation
| Nr. | Mlig455 TC | Pearson corr. | Mlig455 genes | Homologs | Pfam | Full annotation |
|---|
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