M. lignano Single Cells
Mlig455
transcriptome Search Clusters Lineages Gates Plates Cells Vs. Smed Download

MligTC455_53333 (CHRNA7)

Mlig455 TC Mlig455 genes Homologs Pfam Full annotation
MligTC455_53333 Mlig455_019019
Mlig455_055684		 CHRNA7; Chrna7; nAChRalpha2 Neurotransmitter-gated ion-channel ligand binding domain Mlig455_019019:
{Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=154.0]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=93.9]}
{Human: ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=210, Expect=2e-59]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=208, Expect=5e-59]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=207, Expect=8e-59]; ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=206, Expect=3e-58]}
{Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=209, Expect=1e-59]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=205, Expect=3e-58]}
{Dmel: FBgn0000039, nAChRalpha2, nicotinic Acetylcholine Receptor alpha2, [Score=221, Expect=3e-63]}
{Celegans: WBGene00006774, unc-38, Acetylcholine receptor subunit alpha-type unc-38, [Score=190, Expect=7e-53]}
{Smed: dd_Smed_v6_9503_0_1, dd_Smed_v6_9503_0_1, [Score=426, Expect=5e-142]}

Mlig455_055684:
{Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=154.0]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=94.7]}
{Human: ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=211, Expect=9e-60]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=209, Expect=3e-59]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=208, Expect=5e-59]; ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=207, Expect=7e-59]}
{Mouse: ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=209, Expect=9e-60]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=204, Expect=1e-57]}
{Dmel: FBgn0000039, nAChRalpha2, nicotinic Acetylcholine Receptor alpha2, [Score=222, Expect=1e-63]}
{Celegans: WBGene00006774, unc-38, Acetylcholine receptor subunit alpha-type unc-38, [Score=190, Expect=6e-53]}
{Smed: dd_Smed_v6_9503_0_1, dd_Smed_v6_9503_0_1, [Score=427, Expect=3e-142]}

Links: Tomoseq.

Expression, Z-scaled

Variance, Z-scaled

Clusters

Expression, raw

Similar genes by expression

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
1. MligTC455_49594 0.483 Mlig455_025640 RRBP1 Details
2. MligTC455_49593 0.478 Mlig455_025219 RRBP1 Details
3. MligTC455_43173 0.478 Mlig455_037383 C2orf16 Cornifin (SPRR) family Details
4. MligTC455_32028 0.476 Mlig455_019343
Mlig455_019346		 CG11155; GRIA2; Grik2 Ligand-gated ion channel;
Receptor family ligand binding region		 Details
5. MligTC455_50253 0.421 Mlig455_031495 GABRB2; Gabrb2; GluClalpha Neurotransmitter-gated ion-channel transmembrane region Details
6. MligTC455_38791 0.417 Mlig455_044493 Details
7. MligTC455_48435 0.399 Mlig455_011328 F5/8 type C domain Details
8. MligTC455_46067 0.399 Mlig455_054518
Mlig455_055436
Mlig455_055448		 GRIK3; GRIK4; Grik4; Ir25a Ligand-gated ion channel Details
9. MligTC455_25646 0.397 Mlig455_019990 Details
10. MligTC455_00611 0.393 Mlig455_003029 Details
11. MligTC455_32633 0.378 Mlig455_001739
Mlig455_001759
Mlig455_039278		 Tmem196 CD20-like family Details
12. MligTC455_48434 0.377 Mlig455_011250 F5/8 type C domain Details
13. MligTC455_24669 0.357 Mlig455_048025 Details
14. MligTC455_02231 0.35 Mlig455_057921
Mlig455_057951		 Details
15. MligTC455_53741 0.33 Mlig455_014136 Mgat1; POMGNT1; Pomgnt1 GNT-I family Details
16. MligTC455_33441 0.322 Mlig455_068537 CG3822; GRID1; Grid1 Ligand-gated ion channel Details
17. MligTC455_33854 0.32 Mlig455_031601 Details
18. MligTC455_30852 0.318 Mlig455_019345
Mlig455_019563
Mlig455_059135		 CG11155; CG3822; GRIA2; GRIK2; GRIK4; Gria2; Grik2; Grik4 Ligand-gated ion channel;
Receptor family ligand binding region		 Details
19. MligTC455_46697 0.307 Mlig455_009247 WD repeat binding protein EZH2 Details
20. MligTC455_46698 0.307 Mlig455_009652 WD repeat binding protein EZH2 Details
21. MligTC455_47711 0.303 Mlig455_031220 Details
22. MligTC455_39890 0.303 Mlig455_047281
Mlig455_047331
Mlig455_069333		 PLSCR1; Plscr1; scramb1 Scramblase Details (TF)

Similar genes by variation

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
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