M. lignano Single Cells
Mlig455
transcriptome Search Clusters Lineages Gates Plates Cells Vs. Smed Download

MligTC455_16675 (PAX3)

Mlig455 TC Mlig455 genes Homologs Pfam Full annotation
MligTC455_16675 Mlig455_056031 PAX3; Pax7; prd 'Paired box' domain Mlig455_056031:
{TRANSCRIPTION_FACTOR}
{Pfam: 'Paired box' domain [PF00292.20, score=173.3]; Homeodomain [PF00046.31, score=75.8]; Homeodomain-like domain [PF13384.8, score=22.9]; Homeodomain-like domain [PF13565.8, score=21.7]; Winged helix-turn helix [PF13551.8, score=20.5]; Homeobox KN domain [PF05920.13, score=20.4]}
{Human: ENSG00000135903, PAX3, paired box 3, [Score=224, Expect=5e-67]}
{Mouse: ENSMUSG00000028736, Pax7, paired box 7, [Score=224, Expect=9e-67]; ENSMUSG00000004872, Pax3, paired box 3, [Score=221, Expect=5e-66]}
{Dmel: FBgn0003145, prd, paired, [Score=226, Expect=8e-67]}
{Celegans: WBGene00006870, vab-3, MAB-18, [Score=186, Expect=4e-53]}
{Smed: dd_Smed_v6_17726_0_1, dd_Smed_v6_17726_0_1, [Score=187, Expect=5e-53]}

Links: Tomoseq.

Expression, Z-scaled

Variance, Z-scaled

Clusters

Expression, raw

Similar genes by expression

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
1. MligTC455_16676 0.544 Mlig455_057466 PAX3; Pax7; prd 'Paired box' domain Details (TF)
2. MligTC455_06715 0.343 Mlig455_036043 Sspo Pacifastin inhibitor (LCMII) Details
3. MligTC455_00473 0.32 Mlig455_040936 Details
4. MligTC455_40840 0.319 Mlig455_003709
Mlig455_007038
Mlig455_007053
Mlig455_022698		 Orct; SLC22A15; SLC22A6; Scnn1b; Slc22a3; Slc22a7 7 transmembrane receptor (rhodopsin family);
Amiloride-sensitive sodium channel;
Sugar (and other) transporter		 Details
5. MligTC455_54894 0.316 Mlig455_003897 PAN domain Details
6. MligTC455_56823 0.316 Mlig455_006281 Glycine rich protein Details
7. MligTC455_04802 0.316 Mlig455_012291 PCDH9; Pcdh9; ds Cadherin domain Details
8. MligTC455_23829 0.316 Mlig455_026683 CG13151; PGBD4 Transposase IS4 Details
9. MligTC455_06712 0.316 Mlig455_051679 Details

Similar genes by variation

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
Berezikov Lab - 2021 © ERIBA