M. lignano Single Cells
Mlig455
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MligTC455_47417 (Nynrin)

Mlig455 TC Mlig455 genes Homologs Pfam Full annotation
MligTC455_47417 Mlig455_010975
Mlig455_015444
Mlig455_056982
Mlig455_069733		 Nynrin; RTL1 Integrase core domain;
RNase H-like domain found in reverse transcriptase		 Mlig455_010975:
{Pfam: Integrase core domain [PF00665.28, score=44.9]}
{Smed: dd_Smed_v6_94688_0_1, dd_Smed_v6_94688_0_1, [Score=58.5, Expect=2e-11]}

Mlig455_015444:
{Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=105.9]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=100.5]; Integrase zinc binding domain [PF17921.3, score=64.2]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=63.8]; Integrase core domain [PF00665.28, score=43.9]; Zinc knuckle [PF00098.25, score=21.1]}
{Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=86.7, Expect=2e-16]}
{Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=63.2, Expect=2e-09]}
{Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=294, Expect=6e-83]}

Mlig455_056982:
{Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=105.5]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=100.5]; Integrase zinc binding domain [PF17921.3, score=62.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=62.3]; Integrase core domain [PF00665.28, score=43.8]; Zinc knuckle [PF00098.25, score=21.5]}
{Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=91.7, Expect=6e-18]}
{Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=63.9, Expect=1e-09]}
{Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=291, Expect=3e-82]}

Mlig455_069733:
{Pfam: Integrase core domain [PF00665.28, score=45.8]}
{Smed: dd_Smed_v6_94688_0_1, dd_Smed_v6_94688_0_1, [Score=58.5, Expect=4e-11]}

Links: Tomoseq.

Expression, Z-scaled

Variance, Z-scaled

Clusters

Expression, raw

Similar genes by expression

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
1. MligTC455_47412 0.833 Mlig455_025659 Nynrin; RTL1 RNase H-like domain found in reverse transcriptase Details
2. MligTC455_33176 0.37 Mlig455_034551 Abl; Fes; MATK Protein tyrosine and serine/threonine kinase Details
3. MligTC455_47414 0.355 Mlig455_039028 Integrase core domain Details
4. MligTC455_00083 0.316 Mlig455_061910 Details
5. MligTC455_19165 0.313 Mlig455_048534 Details

Similar genes by variation

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
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