M. lignano Single Cells
Mlig455
transcriptome Search Clusters Lineages Gates Plates Cells Vs. Smed Download

MligTC455_14711 (CG8916)

Mlig455 TC Mlig455 genes Homologs Pfam Full annotation
MligTC455_14711 Mlig455_058170
Mlig455_058215		 CG8916; GABRA6; Gabra5 Neurotransmitter-gated ion-channel ligand binding domain Mlig455_058170:
{Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=157.3]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=104.4]}
{Human: ENSG00000145863, GABRA6, gamma-aminobutyric acid type A receptor alpha6 subunit, [RH, Score=295, Expect=2e-95]; ENSG00000186297, GABRA5, gamma-aminobutyric acid type A receptor alpha5 subunit, [RH, Score=295, Expect=5e-95]; ENSG00000022355, GABRA1, gamma-aminobutyric acid type A receptor alpha1 subunit, [RH, Score=290, Expect=3e-93]; ENSG00000011677, GABRA3, gamma-aminobutyric acid type A receptor alpha3 subunit, [RH, Score=287, Expect=9e-92]}
{Mouse: ENSMUSG00000055078, Gabra5, gamma-aminobutyric acid (GABA) A receptor, subunit alpha 5, [RH, Score=293, Expect=1e-94]; ENSMUSG00000010803, Gabra1, gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1, [RH, Score=290, Expect=1e-93]}
{Dmel: FBgn0030707, CG8916, [Score=322, Expect=2e-105]}
{Celegans: WBGene00008551, lgc-36, Ligand-Gated ion Channel, [RH, Score=273, Expect=2e-86]}
{Smed: dd_Smed_v6_24908_0_1, dd_Smed_v6_24908_0_1, [Score=373, Expect=8e-127]}

Mlig455_058215:
{Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=157.3]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=104.4]}
{Human: ENSG00000145863, GABRA6, gamma-aminobutyric acid type A receptor alpha6 subunit, [RH, Score=295, Expect=2e-95]; ENSG00000186297, GABRA5, gamma-aminobutyric acid type A receptor alpha5 subunit, [RH, Score=295, Expect=5e-95]; ENSG00000022355, GABRA1, gamma-aminobutyric acid type A receptor alpha1 subunit, [RH, Score=290, Expect=3e-93]; ENSG00000011677, GABRA3, gamma-aminobutyric acid type A receptor alpha3 subunit, [RH, Score=287, Expect=9e-92]}
{Mouse: ENSMUSG00000055078, Gabra5, gamma-aminobutyric acid (GABA) A receptor, subunit alpha 5, [RH, Score=293, Expect=1e-94]; ENSMUSG00000010803, Gabra1, gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1, [RH, Score=290, Expect=1e-93]}
{Dmel: FBgn0030707, CG8916, [Score=322, Expect=2e-105]}
{Celegans: WBGene00008551, lgc-36, Ligand-Gated ion Channel, [RH, Score=273, Expect=2e-86]}
{Smed: dd_Smed_v6_24908_0_1, dd_Smed_v6_24908_0_1, [Score=373, Expect=8e-127]}

Links: Tomoseq.

Expression, Z-scaled

Variance, Z-scaled

Clusters

Expression, raw

Similar genes by expression

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
1. MligTC455_08714 0.675 Mlig455_012167 Details
2. MligTC455_14710 0.675 Mlig455_058023 CG8916; GABRA6; Gabra5 Neurotransmitter-gated ion-channel ligand binding domain Details
3. MligTC455_45242 0.675 Mlig455_059274 Amiloride-sensitive sodium channel Details
4. MligTC455_01307 0.477 Mlig455_009706 Details
5. MligTC455_14854 0.457 Mlig455_031192 Details
6. MligTC455_12796 0.426 Mlig455_022864 Details
7. MligTC455_10673 0.426 Mlig455_033468 Details
8. MligTC455_40138 0.426 Mlig455_049500 IDNK; Idnk Shikimate kinase Details
9. MligTC455_03025 0.419 Mlig455_018236 Details
10. MligTC455_26209 0.389 Mlig455_011630 Details
11. MligTC455_09156 0.389 Mlig455_017160 Globin Details
12. MligTC455_22116 0.389 Mlig455_018416 Rtl1 RNase H-like domain found in reverse transcriptase Details
13. MligTC455_25049 0.389 Mlig455_041215 LUBEL; RNF31; Rnf31 IBR domain, a half RING-finger domain Details
14. MligTC455_55023 0.389 Mlig455_048831 Details
15. MligTC455_09157 0.346 Mlig455_048111 Globin Details
16. MligTC455_48276 0.336 Mlig455_015378 Angptl1; CG30281; FCN2 Fibrinogen beta and gamma chains, C-terminal globular domain Details
17. MligTC455_10625 0.336 Mlig455_019775 Details
18. MligTC455_14076 0.336 Mlig455_034762 AC004691.2; Aqp8; Eglp2 Major intrinsic protein Details
19. MligTC455_33709 0.336 Mlig455_034860 RNase H-like domain found in reverse transcriptase Details
20. MligTC455_06524 0.336 Mlig455_050395 Reverse transcriptase (RNA-dependent DNA polymerase) Details
21. MligTC455_32627 0.336 Mlig455_059807 Details
22. MligTC455_07622 0.326 Mlig455_048458 Details
23. MligTC455_49939 0.317 Mlig455_010579 CG30463; GALNT1; Galnt5 Glycosyl transferase family 2 Details
24. MligTC455_30150 0.301 Mlig455_039498 Details
25. MligTC455_34236 0.301 Mlig455_047315 Tis11; ZFP36L1; Zfp36l3 Zinc finger C-x8-C-x5-C-x3-H type (and similar) Details
26. MligTC455_05541 0.3 Mlig455_016632 Details
27. MligTC455_02851 0.3 Mlig455_024959 Details
28. MligTC455_53665 0.3 Mlig455_027910 ANKRD50; Ankrd50; mask Ankyrin repeats (3 copies) Details
29. MligTC455_18806 0.3 Mlig455_035072 MCOLN3; Mcoln3; Trpml Polycystin cation channel Details
30. MligTC455_32741 0.3 Mlig455_056284
Mlig455_056309		 NYNRIN; Nynrin RNase H-like domain found in reverse transcriptase Details

Similar genes by variation

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
Berezikov Lab - 2021 © ERIBA