M. lignano Single Cells
Mlig455
transcriptome Search Clusters Lineages Gates Plates Cells Vs. Smed Download

MligTC455_07455 (SIDT1)

Mlig455 TC Mlig455 genes Homologs Pfam Full annotation
MligTC455_07455 Mlig455_018672
Mlig455_021404
Mlig455_021622
Mlig455_034207
Mlig455_060408
Mlig455_061583
Mlig455_065281		 SIDT1; Sidt1 DNA polymerase type B, organellar and viral;
Integrase core domain;
RNase H-like domain found in reverse transcriptase;
dsRNA-gated channel SID-1		 Mlig455_018672:
{Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=106.4]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=80.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=21.5]}
{Smed: dd_Smed_v6_15498_0_18, dd_Smed_v6_15498_0_18, [Score=83.2, Expect=1e-17]}

Mlig455_021404:
{Pfam: dsRNA-gated channel SID-1 [PF13965.8, score=273.9]}
{Human: ENSG00000072858, SIDT1, SID1 transmembrane family member 1, [Score=200, Expect=2e-53]}
{Mouse: ENSMUSG00000022696, Sidt1, SID1 transmembrane family, member 1, [Score=202, Expect=3e-54]}
{Celegans: WBGene00006477, chup-1, CHolesterol UPtake associated, [Score=180, Expect=2e-47]}
{Smed: dd_Smed_v6_8407_0_1, dd_Smed_v6_8407_0_1, [Score=217, Expect=3e-60]}

Mlig455_021622:
{Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=105.1]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=79.4]; Integrase core domain [PF13683.8, score=23.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=20.9]}
{Smed: dd_Smed_v6_15498_0_18, dd_Smed_v6_15498_0_18, [Score=83.2, Expect=2e-17]}

Mlig455_034207:
{Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=106.4]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=80.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=21.5]}
{Smed: dd_Smed_v6_15498_0_18, dd_Smed_v6_15498_0_18, [Score=83.2, Expect=9e-18]}

Mlig455_060408:
{Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=52.1]; Integrase core domain [PF00665.28, score=30.3]; Integrase core domain [PF13683.8, score=24.0]}
{Celegans: WBGene00007723, C25F9.2, [Score=188, Expect=6e-50]}
{Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=72.4, Expect=2e-13]}

Mlig455_061583:
{Pfam: Integrase core domain [PF00665.28, score=29.6]; Integrase core domain [PF13683.8, score=24.0]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=20.3]}
{Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=83.2, Expect=4e-16]}

Mlig455_065281:
{Pfam: Integrase core domain [PF00665.28, score=30.0]; Integrase core domain [PF13683.8, score=26.0]}
{Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=73.9, Expect=6e-15]}

Links: Tomoseq.

Expression, Z-scaled

Variance, Z-scaled

Clusters

Expression, raw

Similar genes by expression

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
1. MligTC455_07447 0.753 Mlig455_008306
Mlig455_064579		 P4HB; P4hb; Pdi Thioredoxin Details
2. MligTC455_07452 0.714 Mlig455_044769
Mlig455_053667		 Lectin C-type domain Details
3. MligTC455_07445 0.709 Mlig455_001801 SLC34A2; Slc34a1 Na+/Pi-cotransporter Details
4. MligTC455_07451 0.439 Mlig455_041738 Details
5. MligTC455_07458 0.425 Mlig455_018875 RNase H-like domain found in reverse transcriptase Details

Similar genes by variation

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
1. MligTC455_07447 0.859 Mlig455_008306
Mlig455_064579		 P4HB; P4hb; Pdi Thioredoxin Details
2. MligTC455_18906 0.348 Mlig455_063115 BTB/POZ domain Details
3. MligTC455_18905 0.344 Mlig455_061696
Mlig455_063090		 BTB/POZ domain Details
4. MligTC455_34462 0.329 Mlig455_033965
Mlig455_058027		 CELF3; Celf3; bru3 Details
5. MligTC455_44246 0.326 Mlig455_054454 ARHGAP19; Arhgap19; RhoGAP54D RhoGAP domain Details
6. MligTC455_34151 0.326 Mlig455_060255 Details
7. MligTC455_42517 0.307 Mlig455_063081 HES1; Hes1; dpn Helix-loop-helix DNA-binding domain Details
8. MligTC455_42518 0.306 Mlig455_061703 HES1; Hes1; dpn Helix-loop-helix DNA-binding domain Details
9. MligTC455_42519 0.303 Mlig455_063107 HES1; Hes1; dpn Helix-loop-helix DNA-binding domain Details
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