M. lignano Single Cells
Mlig455
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MligTC455_24598 (RTL1)

Mlig455 TC Mlig455 genes Homologs Pfam Full annotation
MligTC455_24598 Mlig455_031589
Mlig455_061283
Mlig455_064050
Mlig455_064051
Mlig455_064305
Mlig455_065305		 RTL1; Rtl1 RNase H-like domain found in reverse transcriptase;
Reverse transcriptase (RNA-dependent DNA polymerase)		 Mlig455_031589:
{Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=104.0]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=103.6]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=93.5]; gag-polyprotein putative aspartyl protease [PF13975.8, score=32.7]; Aspartyl protease [PF09668.12, score=26.5]; Aspartyl protease [PF13650.8, score=26.3]; 'Cold-shock' DNA-binding domain [PF00313.24, score=22.7]; Zinc knuckle [PF00098.25, score=22.2]; Protein of unknown function (DUF1759) [PF03564.17, score=19.5]}
{Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=99.8, Expect=2e-20]}
{Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=84.0, Expect=1e-15]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=84.0, Expect=1e-15]}
{Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=296, Expect=8e-88]}

Mlig455_061283:
{Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=104.0]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=103.6]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=93.5]; gag-polyprotein putative aspartyl protease [PF13975.8, score=32.7]; Aspartyl protease [PF09668.12, score=26.5]; Aspartyl protease [PF13650.8, score=26.3]; 'Cold-shock' DNA-binding domain [PF00313.24, score=22.7]; Zinc knuckle [PF00098.25, score=22.2]; Protein of unknown function (DUF1759) [PF03564.17, score=19.5]}
{Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=99.8, Expect=2e-20]}
{Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=84.0, Expect=1e-15]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=84.0, Expect=1e-15]}
{Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=296, Expect=8e-88]}

Mlig455_064050:
{Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=104.3]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=95.3]}
{Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=54.3, Expect=4e-08]}
{Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=53.9, Expect=3e-08]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=53.9, Expect=3e-08]}
{Smed: dd_Smed_v6_15498_0_18, dd_Smed_v6_15498_0_18, [Score=126, Expect=4e-35]}

Mlig455_064051:
{Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=72.4]}
{Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=113, Expect=3e-30]}

Mlig455_064305:
{Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=94.3]}
{Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=144, Expect=3e-40]}

Mlig455_065305:
{Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=72.9]}
{Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=144, Expect=5e-41]}

Links: Tomoseq.

Expression, Z-scaled

Variance, Z-scaled

Clusters

Expression, raw

Similar genes by expression

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
1. MligTC455_24587 0.577 Mlig455_014786 RTL1; Rtl1 Reverse transcriptase (RNA-dependent DNA polymerase) Details
2. MligTC455_39717 0.541 Mlig455_057671 Reverse transcriptase (RNA-dependent DNA polymerase) Details
3. MligTC455_01973 0.387 Mlig455_015563 Details
4. MligTC455_56852 0.387 Mlig455_017057 Details
5. MligTC455_02824 0.387 Mlig455_034814 UGP; UGP2; Ugp2 UTP--glucose-1-phosphate uridylyltransferase Details
6. MligTC455_08298 0.353 Mlig455_053426 Transposase protein Details
7. MligTC455_00072 0.333 Mlig455_001911 Details
8. MligTC455_08297 0.333 Mlig455_003849 Transposase protein Details
9. MligTC455_12605 0.333 Mlig455_009096 Details
10. MligTC455_05535 0.333 Mlig455_017992 Details
11. MligTC455_54912 0.333 Mlig455_020561 THAP domain Details
12. MligTC455_56773 0.333 Mlig455_032361 RNase H-like domain found in reverse transcriptase Details
13. MligTC455_54486 0.333 Mlig455_058669 THAP domain Details
14. MligTC455_24597 0.333 Mlig455_065304 RNase H-like domain found in reverse transcriptase Details
15. MligTC455_05611 0.333 Mlig455_067882 Details
16. MligTC455_22139 0.326 Mlig455_031405 Details

Similar genes by variation

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
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