M. lignano Single Cells
Mlig455
transcriptome Search Clusters Lineages Gates Plates Cells Vs. Smed Download

MligTC455_49901 (VAMP2)

Mlig455 TC Mlig455 genes Homologs Pfam Full annotation
MligTC455_49901 Mlig455_065716 VAMP2; Vamp3; nSyb Synaptobrevin Mlig455_065716:
{TRANSSPLICED}
{Pfam: Synaptobrevin [PF00957.23, score=41.3]}
{Human: ENSG00000220205, VAMP2, vesicle associated membrane protein 2, [Score=66.6, Expect=2e-15]; ENSG00000263620, AC129492.3, novel protein, [Score=66.2, Expect=2e-15]; ENSG00000049245, VAMP3, vesicle associated membrane protein 3, [Score=65.1, Expect=5e-15]; ENSG00000139190, VAMP1, vesicle associated membrane protein 1, [Score=65.1, Expect=9e-15]}
{Mouse: ENSMUSG00000028955, Vamp3, vesicle-associated membrane protein 3, [Score=68.2, Expect=2e-16]; ENSMUSG00000020894, Vamp2, vesicle-associated membrane protein 2, [Score=66.6, Expect=1e-15]; ENSMUSG00000030337, Vamp1, vesicle-associated membrane protein 1, [Score=66.2, Expect=2e-15]}
{Dmel: FBgn0013342, nSyb, neuronal Synaptobrevin, [Score=65.9, Expect=2e-15]}
{Celegans: WBGene00004897, snb-1, Synaptobrevin-1, [Score=62.8, Expect=2e-14]}
{Smed: dd_Smed_v6_6394_0_2, dd_Smed_v6_6394_0_2, [Score=70.1, Expect=2e-17]}

Links: Tomoseq.

Expression, Z-scaled

Variance, Z-scaled

Clusters

Expression, raw

Similar genes by expression

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
1. MligTC455_54768 1.0 Mlig455_022820 Details
2. MligTC455_49241 0.447 Mlig455_008384 Details
3. MligTC455_55430 0.447 Mlig455_064215 CG8916; GABRA6; Gabra6 Neurotransmitter-gated ion-channel ligand binding domain Details
4. MligTC455_20576 0.353 Mlig455_063175 Details
5. MligTC455_13857 0.345 Mlig455_000132 Details
6. MligTC455_31167 0.324 Mlig455_068969 VPS39; Vps39 Vacuolar sorting protein 39 domain 1 Details
7. MligTC455_33530 0.316 Mlig455_002999 RNase H-like domain found in reverse transcriptase Details

Similar genes by variation

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
Berezikov Lab - 2021 © ERIBA