M. lignano Single Cells
Mlig455
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MligTC455_28340 (CHRNB3)

Mlig455 TC Mlig455 genes Homologs Pfam Full annotation
MligTC455_28340 Mlig455_034493
Mlig455_038767
Mlig455_066245		 CHRNB3; Chrnb3; PCDH9; Pcdh9; nAChRalpha4; stan Cadherin domain;
Neurotransmitter-gated ion-channel ligand binding domain		 Mlig455_034493:
{Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=158.8]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=91.2]}
{Human: ENSG00000147432, CHRNB3, cholinergic receptor nicotinic beta 3 subunit, [Score=204, Expect=4e-59]; ENSG00000117971, CHRNB4, cholinergic receptor nicotinic beta 4 subunit, [Score=202, Expect=4e-58]; ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=195, Expect=1e-55]; ENSG00000169684, CHRNA5, cholinergic receptor nicotinic alpha 5 subunit, [Score=194, Expect=2e-55]; ENSG00000101204, CHRNA4, cholinergic receptor nicotinic alpha 4 subunit, [Score=194, Expect=3e-54]}
{Mouse: ENSMUSG00000031492, Chrnb3, cholinergic receptor, nicotinic, beta polypeptide 3, [Score=206, Expect=5e-60]; ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=200, Expect=2e-57]}
{Dmel: FBgn0266347, nAChRalpha4, nicotinic Acetylcholine Receptor alpha4, [Score=190, Expect=8e-54]}
{Celegans: WBGene00000050, acr-11, AcetylCholine Receptor, [Score=185, Expect=1e-52]}
{Smed: dd_Smed_v6_10322_0_1, dd_Smed_v6_10322_0_1, [Score=370, Expect=4e-122]}

Mlig455_038767:
{Pfam: Cadherin domain [PF00028.19, score=325.9]; Cadherin-like [PF16184.7, score=44.8]; Cadherin-like [PF08266.14, score=40.4]}
{Human: ENSG00000184226, PCDH9, protocadherin 9, [RH, Score=339, Expect=1e-98]}
{Mouse: ENSMUSG00000055421, Pcdh9, protocadherin 9, [RH, Score=335, Expect=2e-97]}
{Dmel: FBgn0024836, stan, starry night, [Score=248, Expect=4e-67]}
{Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=214, Expect=3e-56]}
{Smed: dd_Smed_v6_11633_0_1, dd_Smed_v6_11633_0_1, [RH, Score=355, Expect=2e-105]}

Mlig455_066245:
{Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=159.0]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=105.6]}
{Human: ENSG00000147432, CHRNB3, cholinergic receptor nicotinic beta 3 subunit, [Score=208, Expect=1e-60]; ENSG00000117971, CHRNB4, cholinergic receptor nicotinic beta 4 subunit, [Score=207, Expect=4e-60]; ENSG00000101204, CHRNA4, cholinergic receptor nicotinic alpha 4 subunit, [Score=202, Expect=4e-57]; ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=202, Expect=2e-58]; ENSG00000169684, CHRNA5, cholinergic receptor nicotinic alpha 5 subunit, [Score=199, Expect=3e-57]; ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=198, Expect=1e-56]}
{Mouse: ENSMUSG00000031492, Chrnb3, cholinergic receptor, nicotinic, beta polypeptide 3, [Score=210, Expect=2e-61]; ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=206, Expect=1e-59]; ENSMUSG00000027577, Chrna4, cholinergic receptor, nicotinic, alpha polypeptide 4, [Score=201, Expect=2e-56]; ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=201, Expect=4e-58]}
{Dmel: FBgn0266347, nAChRalpha4, nicotinic Acetylcholine Receptor alpha4, [Score=201, Expect=9e-58]}
{Celegans: WBGene00000050, acr-11, AcetylCholine Receptor, [Score=187, Expect=3e-53]}
{Smed: dd_Smed_v6_10322_0_1, dd_Smed_v6_10322_0_1, [RH, Score=424, Expect=6e-143]}

Links: Tomoseq.

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Similar genes by expression

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation

Similar genes by variation

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
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