M. lignano Single Cells
Mlig455
transcriptome Search Clusters Lineages Gates Plates Cells Vs. Smed Download

MligTC455_32573 (CHRNA2)

Mlig455 TC Mlig455 genes Homologs Pfam Full annotation
MligTC455_32573 Mlig455_050903
Mlig455_067814		 CHRNA2; Chrnb3; nAChRalpha6 Neurotransmitter-gated ion-channel ligand binding domain Mlig455_050903:
{Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=157.7]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=98.7]}
{Human: ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=208, Expect=2e-59]; ENSG00000147432, CHRNB3, cholinergic receptor nicotinic beta 3 subunit, [Score=206, Expect=2e-59]; ENSG00000101204, CHRNA4, cholinergic receptor nicotinic alpha 4 subunit, [Score=204, Expect=3e-57]; ENSG00000117971, CHRNB4, cholinergic receptor nicotinic beta 4 subunit, [Score=198, Expect=6e-56]}
{Mouse: ENSMUSG00000031492, Chrnb3, cholinergic receptor, nicotinic, beta polypeptide 3, [Score=203, Expect=2e-58]; ENSMUSG00000027577, Chrna4, cholinergic receptor, nicotinic, alpha polypeptide 4, [Score=201, Expect=4e-56]; ENSMUSG00000022041, Chrna2, cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal), [Score=199, Expect=3e-56]; ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=198, Expect=3e-56]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=197, Expect=7e-56]}
{Dmel: FBgn0032151, nAChRalpha6, nicotinic Acetylcholine Receptor alpha6, [Score=202, Expect=1e-57]}
{Celegans: WBGene00002974, lev-1, Acetylcholine receptor subunit beta-type lev-1, [Score=194, Expect=1e-54]}
{Smed: dd_Smed_v6_10322_0_1, dd_Smed_v6_10322_0_1, [Score=426, Expect=7e-143]}

Mlig455_067814:
{Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=158.1]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=99.0]}
{Human: ENSG00000120903, CHRNA2, cholinergic receptor nicotinic alpha 2 subunit, [Score=208, Expect=4e-60]; ENSG00000147432, CHRNB3, cholinergic receptor nicotinic beta 3 subunit, [Score=207, Expect=3e-60]; ENSG00000101204, CHRNA4, cholinergic receptor nicotinic alpha 4 subunit, [Score=203, Expect=3e-57]; ENSG00000117971, CHRNB4, cholinergic receptor nicotinic beta 4 subunit, [Score=198, Expect=2e-56]}
{Mouse: ENSMUSG00000031492, Chrnb3, cholinergic receptor, nicotinic, beta polypeptide 3, [Score=203, Expect=9e-59]; ENSMUSG00000027577, Chrna4, cholinergic receptor, nicotinic, alpha polypeptide 4, [Score=200, Expect=3e-56]; ENSMUSG00000022041, Chrna2, cholinergic receptor, nicotinic, alpha polypeptide 2 (neuronal), [Score=199, Expect=6e-57]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=197, Expect=3e-56]; ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=197, Expect=2e-56]}
{Dmel: FBgn0032151, nAChRalpha6, nicotinic Acetylcholine Receptor alpha6, [Score=202, Expect=2e-58]}
{Celegans: WBGene00002974, lev-1, Acetylcholine receptor subunit beta-type lev-1, [Score=194, Expect=3e-55]}
{Smed: dd_Smed_v6_10322_0_1, dd_Smed_v6_10322_0_1, [Score=426, Expect=1e-143]}

Links: Tomoseq.

Expression, Z-scaled

Variance, Z-scaled

Clusters

Expression, raw

Similar genes by expression

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
1. MligTC455_03755 0.367 Mlig455_034109 Details
2. MligTC455_55511 0.367 Mlig455_054916 Details
3. MligTC455_20546 0.367 Mlig455_056253 Homeodomain-like domain Details
4. MligTC455_23877 0.367 Mlig455_059665 Otopetrin Details
5. MligTC455_00816 0.367 Mlig455_063830 MSX2; Msx2; lbl Homeodomain Details (TF)
6. MligTC455_46712 0.335 Mlig455_034008 Details
7. MligTC455_19783 0.313 Mlig455_022120 ACE; Ace; Ance Angiotensin-converting enzyme Details
8. MligTC455_02492 0.313 Mlig455_040803 Details
9. MligTC455_02230 0.31 Mlig455_007042 Details

Similar genes by variation

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
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