M. lignano Single Cells
Mlig455
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MligTC455_26617 (NYNRIN)

Mlig455 TC Mlig455 genes Homologs Pfam Full annotation
MligTC455_26617 Mlig455_004280
Mlig455_018851
Mlig455_060088
Mlig455_068930		 NYNRIN; Nynrin; RTL1 RNase H-like domain found in reverse transcriptase Mlig455_004280:
{Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=100.1]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=90.9]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=87.5]; Integrase zinc binding domain [PF17921.3, score=48.9]; Integrase core domain [PF00665.28, score=44.6]; H2C2 zinc finger [PF09337.12, score=19.9]}
{Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=87.4, Expect=8e-17]}
{Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=68.9, Expect=3e-11]}
{Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=346, Expect=2e-103]}

Mlig455_018851:
{Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=105.9]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=90.3]; Integrase zinc binding domain [PF17921.3, score=52.5]; Integrase core domain [PF00665.28, score=43.2]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=39.5]; H2C2 zinc finger [PF09337.12, score=19.0]}
{Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=74.7, Expect=8e-13]}
{Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=75.9, Expect=3e-13]}
{Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=271, Expect=6e-76]}

Mlig455_060088:
{Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=97.5]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=82.7]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=27.1]}
{Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=212, Expect=5e-59]}

Mlig455_068930:
{Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=105.1]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=89.9]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=84.8]; Integrase zinc binding domain [PF17921.3, score=51.9]; Integrase core domain [PF00665.28, score=48.3]; H2C2 zinc finger [PF09337.12, score=20.0]; Viral RNA-dependent RNA polymerase [PF00680.22, score=17.5]}
{Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=74.3, Expect=1e-12]}
{Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=69.7, Expect=2e-11]}
{Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=290, Expect=8e-83]}

Links: Tomoseq.

Expression, Z-scaled

Variance, Z-scaled

Clusters

Expression, raw

Similar genes by expression

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
1. MligTC455_07180 0.687 Mlig455_018840 RNase H-like domain found in reverse transcriptase Details
2. MligTC455_56787 0.426 Mlig455_008102 Winged helix-turn helix Details
3. MligTC455_53740 0.426 Mlig455_017104 Details
4. MligTC455_08802 0.368 Mlig455_044592 Reverse transcriptase (RNA-dependent DNA polymerase) Details
5. MligTC455_57190 0.337 Mlig455_030588 Details
6. MligTC455_54425 0.337 Mlig455_033504 Domain of unknown function (DUF4081) Details
7. MligTC455_03149 0.337 Mlig455_057289 Details
8. MligTC455_26618 0.335 Mlig455_055010 RTL1 RNase H-like domain found in reverse transcriptase Details
9. MligTC455_26616 0.332 Mlig455_004291
Mlig455_039373
Mlig455_048166		 NYNRIN; Nynrin; RTL1 RNase H-like domain found in reverse transcriptase Details
10. MligTC455_05064 0.315 Mlig455_026558 PRR9; Thumpd2 Details
11. MligTC455_36575 0.309 Mlig455_018039 Plexin repeat Details
12. MligTC455_17347 0.3 Mlig455_025166 CR1; Csmd1 Sushi repeat (SCR repeat) Details
13. MligTC455_29731 0.3 Mlig455_014239
Mlig455_034697		 Nynrin; RTL1 RNase H-like domain found in reverse transcriptase Details
14. MligTC455_05213 0.3 Mlig455_042227 PRR9 Details

Similar genes by variation

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
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