M. lignano Single Cells
Mlig455
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MligTC455_10713 (RTL1)

Mlig455 TC Mlig455 genes Homologs Pfam Full annotation
MligTC455_10713 Mlig455_006846
Mlig455_052188
Mlig455_063999
Mlig455_070416		 RTL1; Rtl1 Retrotransposon gag protein;
Reverse transcriptase (RNA-dependent DNA polymerase)		 Mlig455_006846:
{Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=104.2]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=100.1]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=99.4]; Integrase core domain [PF00665.28, score=49.1]; Integrase zinc binding domain [PF17921.3, score=38.4]; Aspartyl protease [PF13650.8, score=25.0]; gag-polyprotein putative aspartyl protease [PF13975.8, score=24.0]}
{Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=112, Expect=6e-24]}
{Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=91.3, Expect=9e-18]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=91.3, Expect=9e-18]}
{Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=310, Expect=4e-92]}

Mlig455_052188:
{Pfam: Retrotransposon gag protein [PF03732.19, score=19.3]}

Mlig455_063999:
{Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=104.2]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=100.1]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=99.4]; Integrase core domain [PF00665.28, score=49.1]; Integrase zinc binding domain [PF17921.3, score=38.4]; Aspartyl protease [PF13650.8, score=25.0]; gag-polyprotein putative aspartyl protease [PF13975.8, score=24.0]}
{Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=112, Expect=6e-24]}
{Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=91.3, Expect=9e-18]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=91.3, Expect=9e-18]}
{Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=310, Expect=4e-92]}

Mlig455_070416:
{Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=104.2]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=100.1]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=99.4]; Integrase core domain [PF00665.28, score=49.1]; Integrase zinc binding domain [PF17921.3, score=38.4]; Aspartyl protease [PF13650.8, score=25.0]; gag-polyprotein putative aspartyl protease [PF13975.8, score=24.0]}
{Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=112, Expect=6e-24]}
{Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=91.3, Expect=9e-18]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=91.3, Expect=9e-18]}
{Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=310, Expect=4e-92]}

Links: Tomoseq.

Expression, Z-scaled

Variance, Z-scaled

Clusters

Expression, raw

Similar genes by expression

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
1. MligTC455_10711 0.383 Mlig455_001819
Mlig455_001825
Mlig455_001826		 RTL1; Rtl1 RNase H-like domain found in reverse transcriptase;
Reverse transcriptase (RNA-dependent DNA polymerase)		 Details
2. MligTC455_10710 0.342 Mlig455_032684 Integrase core domain Details

Similar genes by variation

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
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