MligTC455_33704 (COL5A2)
| Mlig455 TC | Mlig455 genes | Homologs | Pfam | Full annotation |
|---|---|---|---|---|
| MligTC455_33704 | Mlig455_002733 | COL5A2; Col9a1; vkg | Collagen triple helix repeat (20 copies) | Mlig455_002733: {Pfam: Collagen triple helix repeat (20 copies) [PF01391.20, score=136.4]; Myotubularin protein [PF12335.10, score=23.9]} {Human: ENSG00000204262, COL5A2, collagen type V alpha 2 chain, [Score=113, Expect=6e-25]; ENSG00000049089, COL9A2, collagen type IX alpha 2 chain, [Score=111, Expect=1e-24]} {Mouse: ENSMUSG00000026147, Col9a1, collagen, type IX, alpha 1, [Score=124, Expect=2e-28]; ENSMUSG00000026042, Col5a2, collagen, type V, alpha 2, [Score=122, Expect=1e-27]; ENSMUSG00000041984, Rptn, repetin, [Score=121, Expect=1e-27]; ENSMUSG00000045672, Col27a1, collagen, type XXVII, alpha 1, [Score=120, Expect=3e-27]} {Dmel: FBgn0016075, vkg, viking, [Score=106, Expect=5e-23]} {Celegans: WBGene00000708, col-135, COLlagen, [Score=84.0, Expect=2e-16]} {Smed: dd_Smed_v6_8075_0_1, dd_Smed_v6_8075_0_1, [Score=140, Expect=9e-34]} |
Links: Tomoseq.
Expression, Z-scaled
Variance, Z-scaled
Clusters
Expression, raw
Similar genes by expression
| Nr. | Mlig455 TC | Pearson corr. | Mlig455 genes | Homologs | Pfam | Full annotation |
|---|---|---|---|---|---|---|
| 1. | MligTC455_33705 | 0.84 | Mlig455_063348 | COL9A2; Col5a2; vkg | Collagen triple helix repeat (20 copies) | Details |
| 2. | MligTC455_33703 | 0.731 | Mlig455_002442 | Details | ||
| 3. | MligTC455_53579 | 0.374 | Mlig455_010515 | 7B2 | Neuroendocrine protein 7B2 precursor (Secretogranin V) | Details |
| 4. | MligTC455_47806 | 0.368 | Mlig455_033677 | Details | ||
| 5. | MligTC455_24064 | 0.368 | Mlig455_048183 | SNAP25; Snap24; Snap25 | SNAP-25 family | Details |
| 6. | MligTC455_47807 | 0.366 | Mlig455_050143 | Details | ||
| 7. | MligTC455_20574 | 0.364 | Mlig455_021418 | PCSK2; Pcsk2; amon | Peptidase S8 pro-domain | Details |
| 8. | MligTC455_53580 | 0.361 | Mlig455_061858 | Neuroendocrine protein 7B2 precursor (Secretogranin V) | Details | |
| 9. | MligTC455_28560 | 0.35 | Mlig455_028251 | SYT11; Syt11; Syt4 | C2 domain | Details |
| 10. | MligTC455_36842 | 0.348 | Mlig455_056552 | SYT11; Syt11; Syt4 | C2 domain | Details |
| 11. | MligTC455_33702 | 0.329 | Mlig455_002443 | COL5A2; Col4a1; Col5a2 | Collagen triple helix repeat (20 copies) | Details |
| 12. | MligTC455_46067 | 0.329 | Mlig455_054518 Mlig455_055436 Mlig455_055448 |
GRIK3; GRIK4; Grik4; Ir25a | Ligand-gated ion channel | Details |
| 13. | MligTC455_24061 | 0.327 | Mlig455_017234 | SNAP25; Snap24; Snap25 | SNAP-25 family | Details |
| 14. | MligTC455_49337 | 0.325 | Mlig455_004942 | CA7; CAH1; Car7 | Eukaryotic-type carbonic anhydrase | Details |
| 15. | MligTC455_17633 | 0.318 | Mlig455_066373 | Amt; RHBG | Ammonium Transporter Family | Details |
| 16. | MligTC455_50861 | 0.316 | Mlig455_050457 | CPLX2; Cplx2; cpx | Synaphin protein | Details |
| 17. | MligTC455_28559 | 0.315 | Mlig455_028180 | SYT11; Syt11; Syt4 | C2 domain | Details |
| 18. | MligTC455_48651 | 0.313 | Mlig455_038678 | IA-2; PTPRN; Ptprn | Protein-tyrosine phosphatase | Details |
| 19. | MligTC455_49593 | 0.304 | Mlig455_025219 | RRBP1 | Details | |
| 20. | MligTC455_51195 | 0.302 | Mlig455_020957 | CDK5R1; Cdk5alpha; Cdk5r1 | Cyclin-dependent kinase 5 activator protein | Details |
Similar genes by variation
| Nr. | Mlig455 TC | Pearson corr. | Mlig455 genes | Homologs | Pfam | Full annotation |
|---|
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