M. lignano Single Cells
Mlig455
transcriptome Search Clusters Lineages Gates Plates Cells Vs. Smed Download

MligTC455_33705 (COL9A2)

Mlig455 TC Mlig455 genes Homologs Pfam Full annotation
MligTC455_33705 Mlig455_063348 COL9A2; Col5a2; vkg Collagen triple helix repeat (20 copies) Mlig455_063348:
{Pfam: Collagen triple helix repeat (20 copies) [PF01391.20, score=100.7]; Myotubularin protein [PF12335.10, score=23.7]}
{Human: ENSG00000049089, COL9A2, collagen type IX alpha 2 chain, [Score=112, Expect=8e-25]; ENSG00000204262, COL5A2, collagen type V alpha 2 chain, [Score=111, Expect=4e-24]}
{Mouse: ENSMUSG00000026042, Col5a2, collagen, type V, alpha 2, [Score=119, Expect=1e-26]; ENSMUSG00000045672, Col27a1, collagen, type XXVII, alpha 1, [Score=117, Expect=3e-26]; ENSMUSG00000026147, Col9a1, collagen, type IX, alpha 1, [Score=116, Expect=4e-26]; ENSMUSG00000028626, Col9a2, collagen, type IX, alpha 2, [Score=115, Expect=5e-26]}
{Dmel: FBgn0016075, vkg, viking, [Score=106, Expect=7e-23]}
{Celegans: WBGene00001263, emb-9, Collagen alpha-1(IV) chain, [Score=80.9, Expect=4e-15]}
{Smed: dd_Smed_v6_832_0_1, dd_Smed_v6_832_0_1, [Score=140, Expect=1e-33]}

Links: Tomoseq.

Expression, Z-scaled

Variance, Z-scaled

Clusters

Expression, raw

Similar genes by expression

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
1. MligTC455_33704 0.84 Mlig455_002733 COL5A2; Col9a1; vkg Collagen triple helix repeat (20 copies) Details
2. MligTC455_33703 0.826 Mlig455_002442 Details
3. MligTC455_47806 0.41 Mlig455_033677 Details
4. MligTC455_47807 0.402 Mlig455_050143 Details
5. MligTC455_24064 0.399 Mlig455_048183 SNAP25; Snap24; Snap25 SNAP-25 family Details
6. MligTC455_53579 0.389 Mlig455_010515 7B2 Neuroendocrine protein 7B2 precursor (Secretogranin V) Details
7. MligTC455_20574 0.388 Mlig455_021418 PCSK2; Pcsk2; amon Peptidase S8 pro-domain Details
8. MligTC455_53580 0.387 Mlig455_061858 Neuroendocrine protein 7B2 precursor (Secretogranin V) Details
9. MligTC455_46067 0.372 Mlig455_054518
Mlig455_055436
Mlig455_055448		 GRIK3; GRIK4; Grik4; Ir25a Ligand-gated ion channel Details
10. MligTC455_17633 0.37 Mlig455_066373 Amt; RHBG Ammonium Transporter Family Details
11. MligTC455_28560 0.367 Mlig455_028251 SYT11; Syt11; Syt4 C2 domain Details
12. MligTC455_24061 0.365 Mlig455_017234 SNAP25; Snap24; Snap25 SNAP-25 family Details
13. MligTC455_36842 0.354 Mlig455_056552 SYT11; Syt11; Syt4 C2 domain Details
14. MligTC455_48651 0.341 Mlig455_038678 IA-2; PTPRN; Ptprn Protein-tyrosine phosphatase Details
15. MligTC455_28559 0.337 Mlig455_028180 SYT11; Syt11; Syt4 C2 domain Details
16. MligTC455_49337 0.333 Mlig455_004942 CA7; CAH1; Car7 Eukaryotic-type carbonic anhydrase Details
17. MligTC455_49593 0.332 Mlig455_025219 RRBP1 Details
18. MligTC455_51195 0.331 Mlig455_020957 CDK5R1; Cdk5alpha; Cdk5r1 Cyclin-dependent kinase 5 activator protein Details
19. MligTC455_44372 0.325 Mlig455_016467 Inx2 Innexin Details
20. MligTC455_49594 0.324 Mlig455_025640 RRBP1 Details
21. MligTC455_49219 0.324 Mlig455_039874 FUT3; FucTA; Fut9 Glycosyltransferase family 10 (fucosyltransferase) C-term Details
22. MligTC455_51194 0.313 Mlig455_007624
Mlig455_007645		 CDK5R1; Cdk5alpha; Cdk5r1 Cyclin-dependent kinase 5 activator protein Details
23. MligTC455_50861 0.311 Mlig455_050457 CPLX2; Cplx2; cpx Synaphin protein Details
24. MligTC455_53109 0.31 Mlig455_067651 Details
25. MligTC455_32325 0.308 Mlig455_067233 PCSK2; Pcsk2; amon Subtilase family Details
26. MligTC455_49338 0.304 Mlig455_019714 CA7; CAH1; Car7 Eukaryotic-type carbonic anhydrase Details

Similar genes by variation

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
Berezikov Lab - 2021 © ERIBA