MligTC455_31118 (TRPA1)
| Mlig455 TC | Mlig455 genes | Homologs | Pfam | Full annotation |
|---|---|---|---|---|
| MligTC455_31118 | Mlig455_012685 | TRPA1; TrpA1; Trpa1 | Ankyrin repeats (3 copies) | Mlig455_012685: {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=187.6]; Ankyrin repeats (many copies) [PF13857.8, score=142.6]; Ankyrin repeats (many copies) [PF13637.8, score=142.2]; Ankyrin repeat [PF00023.32, score=133.5]; Ankyrin repeat [PF13606.8, score=120.9]; Ion transport protein [PF00520.33, score=43.3]} {Human: ENSG00000104321, TRPA1, transient receptor potential cation channel subfamily A member 1, [RH, Score=449, Expect=2e-139]} {Mouse: ENSMUSG00000032769, Trpa1, transient receptor potential cation channel, subfamily A, member 1, [RH, Score=462, Expect=2e-144]} {Dmel: FBgn0035934, TrpA1, Transient receptor potential cation channel A1, [Score=456, Expect=2e-141]} {Celegans: WBGene00007801, trpa-1, Transient receptor potential cation channel subfamily A member 1 homolog, [Score=220, Expect=2e-58]} {Smed: dd_Smed_v6_14207_0_1, dd_Smed_v6_14207_0_1, [RH, Score=588, Expect=0.0]} |
Links: Tomoseq.
Expression, Z-scaled
Variance, Z-scaled
Clusters
Expression, raw
Similar genes by expression
| Nr. | Mlig455 TC | Pearson corr. | Mlig455 genes | Homologs | Pfam | Full annotation |
|---|---|---|---|---|---|---|
| 1. | MligTC455_17521 | 0.58 | Mlig455_022352 | WSC domain | Details | |
| 2. | MligTC455_24164 | 0.531 | Mlig455_014037 | LRRK2; Lrrk; Lrrk2 | C-terminal of Roc, COR, domain | Details |
| 3. | MligTC455_17520 | 0.458 | Mlig455_022340 | WSC domain | Details | |
| 4. | MligTC455_42087 | 0.455 | Mlig455_028171 | Details | ||
| 5. | MligTC455_04776 | 0.449 | Mlig455_015865 | ASIC1; Asic3 | Amiloride-sensitive sodium channel | Details |
| 6. | MligTC455_53219 | 0.449 | Mlig455_016086 | Amiloride-sensitive sodium channel | Details | |
| 7. | MligTC455_16135 | 0.449 | Mlig455_038539 | CHRNA10; Chrna10; nAChRalpha3 | Neurotransmitter-gated ion-channel transmembrane region | Details |
| 8. | MligTC455_49878 | 0.435 | Mlig455_050656 | CHRNA10; Chrna10; nAChRalpha2 | Neurotransmitter-gated ion-channel ligand binding domain | Details |
| 9. | MligTC455_47664 | 0.389 | Mlig455_012671 | Details | ||
| 10. | MligTC455_42088 | 0.387 | Mlig455_028244 | Details | ||
| 11. | MligTC455_11735 | 0.375 | Mlig455_055836 | Details | ||
| 12. | MligTC455_53190 | 0.372 | Mlig455_013516 | SCNN1B; Scnn1g; ppk22 | Amiloride-sensitive sodium channel | Details |
| 13. | MligTC455_52699 | 0.363 | Mlig455_031872 | Scnn1b | Amiloride-sensitive sodium channel | Details |
| 14. | MligTC455_49876 | 0.358 | Mlig455_027453 | CHRNA10; Chrna10; nAChRalpha4 | Neurotransmitter-gated ion-channel ligand binding domain | Details |
| 15. | MligTC455_52405 | 0.355 | Mlig455_000759 | Details | ||
| 16. | MligTC455_49875 | 0.353 | Mlig455_027217 | nAChRalpha2 | Neurotransmitter-gated ion-channel ligand binding domain | Details |
| 17. | MligTC455_26092 | 0.352 | Mlig455_048489 | Lectin C-type domain | Details | |
| 18. | MligTC455_19325 | 0.351 | Mlig455_036471 Mlig455_056256 |
Details | ||
| 19. | MligTC455_47395 | 0.342 | Mlig455_052211 | CHRNA10; Chrna10; nAChRalpha3 | Neurotransmitter-gated ion-channel transmembrane region | Details |
| 20. | MligTC455_44344 | 0.331 | Mlig455_034809 | ECE2; Gm49333; Nep1 | Peptidase family M13 | Details |
| 21. | MligTC455_55216 | 0.331 | Mlig455_037112 | CHRNA9; Chrna9; nAChRalpha2 | Neurotransmitter-gated ion-channel transmembrane region | Details |
Similar genes by variation
| Nr. | Mlig455 TC | Pearson corr. | Mlig455 genes | Homologs | Pfam | Full annotation |
|---|
Berezikov Lab - 2021 © ERIBA