M. lignano Single Cells
Mlig455
transcriptome Search Clusters Lineages Gates Plates Cells Vs. Smed Download

MligTC455_24209 (GRIA2)

Mlig455 TC Mlig455 genes Homologs Pfam Full annotation
MligTC455_24209 Mlig455_051826 GRIA2; GluRIA; Gria2 Ligand-gated ion channel Mlig455_051826:
{Pfam: Ligand-gated ion channel [PF00060.28, score=132.0]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=116.8]; Receptor family ligand binding region [PF01094.30, score=85.9]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=77.7]}
{Human: ENSG00000120251, GRIA2, glutamate ionotropic receptor AMPA type subunit 2, [Score=472, Expect=9e-151]; ENSG00000152578, GRIA4, glutamate ionotropic receptor AMPA type subunit 4, [Score=467, Expect=9e-149]; ENSG00000125675, GRIA3, glutamate ionotropic receptor AMPA type subunit 3, [Score=457, Expect=6e-145]; ENSG00000155511, GRIA1, glutamate ionotropic receptor AMPA type subunit 1, [Score=456, Expect=4e-145]}
{Mouse: ENSMUSG00000033981, Gria2, glutamate receptor, ionotropic, AMPA2 (alpha 2), [Score=474, Expect=8e-152]; ENSMUSG00000025892, Gria4, glutamate receptor, ionotropic, AMPA4 (alpha 4), [Score=469, Expect=1e-149]; ENSMUSG00000001986, Gria3, glutamate receptor, ionotropic, AMPA3 (alpha 3), [Score=458, Expect=1e-145]; ENSMUSG00000020524, Gria1, glutamate receptor, ionotropic, AMPA1 (alpha 1), [Score=454, Expect=1e-143]}
{Dmel: FBgn0004619, GluRIA, Glutamate receptor IA, [Score=424, Expect=6e-132]}
{Celegans: WBGene00001612, glr-1, Glutamate receptor 1, [Score=346, Expect=3e-103]}
{Smed: dd_Smed_v6_17901_0_1, dd_Smed_v6_17901_0_1, [Score=490, Expect=6e-158]}

Links: Tomoseq.

Expression, Z-scaled

Variance, Z-scaled

Clusters

Expression, raw

Similar genes by expression

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
1. MligTC455_25773 0.577 Mlig455_024281 LRRC74A; Lrrc74a; RanGAP Leucine Rich repeat Details
2. MligTC455_02204 0.577 Mlig455_031453 Reverse transcriptase (RNA-dependent DNA polymerase) Details
3. MligTC455_03872 0.577 Mlig455_038172 DDE superfamily endonuclease Details
4. MligTC455_55909 0.577 Mlig455_048979 7 transmembrane receptor (rhodopsin family) Details
5. MligTC455_12464 0.577 Mlig455_064566 CG7409; HSPB8; Hspb8 Hsp20/alpha crystallin family Details
6. MligTC455_12465 0.577 Mlig455_064567 CG7409; HSPB8; Hspb8 Hsp20/alpha crystallin family Details
7. MligTC455_04013 0.577 Mlig455_055631
Mlig455_066015		 Details
8. MligTC455_14627 0.408 Mlig455_026953 BspA type Leucine rich repeat region (6 copies) Details
9. MligTC455_44556 0.408 Mlig455_012485
Mlig455_028891		 DDE superfamily endonuclease;
Transposase		 Details
10. MligTC455_12462 0.408 Mlig455_040696 CG7409; HSPB8; Hspb8 Hsp20/alpha crystallin family Details
11. MligTC455_07895 0.408 Mlig455_048545 CA10; CG1402; Car10 Eukaryotic-type carbonic anhydrase Details
12. MligTC455_47238 0.408 Mlig455_050029 CG13604; UBASH3B; Ubash3b Histidine phosphatase superfamily (branch 1) Details
13. MligTC455_55523 0.408 Mlig455_060745 Details
14. MligTC455_50651 0.408 Mlig455_069247 Drought induced 19 protein (Di19), zinc-binding Details
15. MligTC455_02643 0.358 Mlig455_034983 Details
16. MligTC455_48219 0.358 Mlig455_059197 Details
17. MligTC455_00461 0.347 Mlig455_007064 Details
18. MligTC455_14629 0.342 Mlig455_018033
Mlig455_049740		 Details
19. MligTC455_34950 0.335 Mlig455_043524 Details
20. MligTC455_08687 0.335 Mlig455_019648
Mlig455_070822		 Details
21. MligTC455_39685 0.333 Mlig455_003399 Details
22. MligTC455_03714 0.333 Mlig455_006627 Details
23. MligTC455_02293 0.333 Mlig455_007602 Integrase core domain Details
24. MligTC455_55481 0.333 Mlig455_012760 Reverse transcriptase (RNA-dependent DNA polymerase) Details
25. MligTC455_34470 0.333 Mlig455_021889 Details
26. MligTC455_00664 0.333 Mlig455_027695 Details
27. MligTC455_57210 0.333 Mlig455_035738 Details
28. MligTC455_00665 0.333 Mlig455_047758 Details
29. MligTC455_08664 0.33 Mlig455_038240 Details
30. MligTC455_56682 0.322 Mlig455_053701 Details
31. MligTC455_20805 0.312 Mlig455_044028 SBF1; Sbf; Sbf1 Myotubularin-like phosphatase domain Details

Similar genes by variation

Nr. Mlig455 TC Pearson corr. Mlig455 genes Homologs Pfam Full annotation
Berezikov Lab - 2021 © ERIBA