MligTC455_22105 (Rtl1)
| Mlig455 TC | Mlig455 genes | Homologs | Pfam | Full annotation |
|---|---|---|---|---|
| MligTC455_22105 | Mlig455_041722 | Rtl1 | RNase H-like domain found in reverse transcriptase | Mlig455_041722: {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=66.9]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=53.8]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=28.0]; Integrase core domain [PF13683.8, score=23.3]; Integrase core domain [PF00665.28, score=22.5]} {Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=73.9, Expect=6e-13]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=73.9, Expect=6e-13]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=164, Expect=3e-43]} |
Links: Tomoseq.
Expression, Z-scaled
Variance, Z-scaled
Clusters
Expression, raw
Similar genes by expression
| Nr. | Mlig455 TC | Pearson corr. | Mlig455 genes | Homologs | Pfam | Full annotation |
|---|---|---|---|---|---|---|
| 1. | MligTC455_22110 | 0.51 | Mlig455_070381 | Rtl1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Details |
| 2. | MligTC455_22108 | 0.47 | Mlig455_057403 | RTL1; Rtl1 | RNase H-like domain found in reverse transcriptase | Details |
| 3. | MligTC455_23560 | 0.414 | Mlig455_045559 | Details | ||
| 4. | MligTC455_22111 | 0.319 | Mlig455_064947 | RNase H-like domain found in reverse transcriptase | Details | |
| 5. | MligTC455_34112 | 0.317 | Mlig455_013791 Mlig455_013923 |
AC243734.1; CHRNA7; Chrna7; nAChRalpha7 | Neurotransmitter-gated ion-channel ligand binding domain | Details |
| 6. | MligTC455_22109 | 0.315 | Mlig455_065620 Mlig455_065632 |
RTL1; Rtl1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Details |
| 7. | MligTC455_34111 | 0.313 | Mlig455_013788 Mlig455_013920 |
Ank2; TRPA1; TrpA1; Trpa1 | Ankyrin repeats (3 copies) | Details |
| 8. | MligTC455_18860 | 0.312 | Mlig455_004323 | Details | ||
| 9. | MligTC455_22544 | 0.312 | Mlig455_010603 | SLC18A3; Slc18a3; Vmat | Major Facilitator Superfamily | Details |
| 10. | MligTC455_24971 | 0.312 | Mlig455_012295 Mlig455_012300 |
Details | ||
| 11. | MligTC455_24988 | 0.311 | Mlig455_014595 | SAP domain | Details | |
| 12. | MligTC455_24972 | 0.31 | Mlig455_021746 Mlig455_033584 Mlig455_062877 Mlig455_062878 Mlig455_067070 Mlig455_067071 |
Muc55B | Domain of unknown function (DUF6471) | Details |
| 13. | MligTC455_22543 | 0.308 | Mlig455_010585 | Major Facilitator Superfamily | Details | |
| 14. | MligTC455_18859 | 0.307 | Mlig455_004254 | Details | ||
| 15. | MligTC455_34381 | 0.304 | Mlig455_043705 Mlig455_067910 |
SAP domain | Details | |
| 16. | MligTC455_33526 | 0.303 | Mlig455_033689 | Details | ||
| 17. | MligTC455_19611 | 0.303 | Mlig455_011014 Mlig455_048599 Mlig455_048678 Mlig455_048711 |
7 transmembrane receptor (rhodopsin family) | Details | |
| 18. | MligTC455_33525 | 0.302 | Mlig455_033680 Mlig455_050140 |
Details |
Similar genes by variation
| Nr. | Mlig455 TC | Pearson corr. | Mlig455 genes | Homologs | Pfam | Full annotation |
|---|
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