MligTC455_22108 (RTL1)
| Mlig455 TC | Mlig455 genes | Homologs | Pfam | Full annotation |
|---|---|---|---|---|
| MligTC455_22108 | Mlig455_057403 | RTL1; Rtl1 | RNase H-like domain found in reverse transcriptase | Mlig455_057403: {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=100.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=70.6]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=59.4]; Integrase zinc binding domain [PF17921.3, score=48.1]; Integrase core domain [PF00665.28, score=41.0]; gag-polyprotein putative aspartyl protease [PF13975.8, score=29.1]; H2C2 zinc finger [PF09337.12, score=24.0]; Aspartyl protease [PF13650.8, score=23.6]; Integrase core domain [PF13683.8, score=19.9]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=102, Expect=4e-21]} {Mouse: ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=89.0, Expect=3e-17]; ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=89.0, Expect=3e-17]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=231, Expect=3e-62]} |
Links: Tomoseq.
Expression, Z-scaled
Variance, Z-scaled
Clusters
Expression, raw
Similar genes by expression
| Nr. | Mlig455 TC | Pearson corr. | Mlig455 genes | Homologs | Pfam | Full annotation |
|---|---|---|---|---|---|---|
| 1. | MligTC455_22110 | 0.798 | Mlig455_070381 | Rtl1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Details |
| 2. | MligTC455_22109 | 0.688 | Mlig455_065620 Mlig455_065632 |
RTL1; Rtl1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Details |
| 3. | MligTC455_22104 | 0.516 | Mlig455_018878 | RTL1; Rtl1 | RNase H-like domain found in reverse transcriptase | Details |
| 4. | MligTC455_22105 | 0.47 | Mlig455_041722 | Rtl1 | RNase H-like domain found in reverse transcriptase | Details |
| 5. | MligTC455_24988 | 0.346 | Mlig455_014595 | SAP domain | Details | |
| 6. | MligTC455_32585 | 0.327 | Mlig455_048091 | Details | ||
| 7. | MligTC455_14946 | 0.323 | Mlig455_014061 | Glycosyltransferase sugar-binding region containing DXD motif | Details | |
| 8. | MligTC455_42708 | 0.321 | Mlig455_027999 Mlig455_028026 |
Details | ||
| 9. | MligTC455_14948 | 0.311 | Mlig455_070128 | Glycosyltransferase sugar-binding region containing DXD motif | Details | |
| 10. | MligTC455_42001 | 0.31 | Mlig455_061720 | CG2453; Coq3 | Methyltransferase domain | Details |
| 11. | MligTC455_24972 | 0.307 | Mlig455_021746 Mlig455_033584 Mlig455_062877 Mlig455_062878 Mlig455_067070 Mlig455_067071 |
Muc55B | Domain of unknown function (DUF6471) | Details |
| 12. | MligTC455_08084 | 0.306 | Mlig455_026410 | SAP domain | Details | |
| 13. | MligTC455_24989 | 0.305 | Mlig455_008450 Mlig455_033328 Mlig455_042647 |
SAP domain | Details | |
| 14. | MligTC455_22111 | 0.303 | Mlig455_064947 | RNase H-like domain found in reverse transcriptase | Details |
Similar genes by variation
| Nr. | Mlig455 TC | Pearson corr. | Mlig455 genes | Homologs | Pfam | Full annotation |
|---|
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