MligTC455_22109 (RTL1)
| Mlig455 TC | Mlig455 genes | Homologs | Pfam | Full annotation |
|---|---|---|---|---|
| MligTC455_22109 | Mlig455_065620 Mlig455_065632 |
RTL1; Rtl1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Mlig455_065620: {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=65.7]; gag-polyprotein putative aspartyl protease [PF13975.8, score=30.4]; Aspartyl protease [PF13650.8, score=25.9]; Retroviral aspartyl protease [PF00077.22, score=19.6]; Zinc knuckle [PF00098.25, score=18.9]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=71.2, Expect=5e-12]} {Mouse: ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=58.9, Expect=2e-08]; ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=58.9, Expect=2e-08]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=167, Expect=2e-44]} Mlig455_065632: {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=65.7]; gag-polyprotein putative aspartyl protease [PF13975.8, score=30.4]; Aspartyl protease [PF13650.8, score=25.9]; Retroviral aspartyl protease [PF00077.22, score=19.6]; Zinc knuckle [PF00098.25, score=18.9]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=71.2, Expect=5e-12]} {Mouse: ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=58.9, Expect=2e-08]; ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=58.9, Expect=2e-08]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=167, Expect=2e-44]} |
Links: Tomoseq.
Expression, Z-scaled
Variance, Z-scaled
Clusters
Expression, raw
Similar genes by expression
| Nr. | Mlig455 TC | Pearson corr. | Mlig455 genes | Homologs | Pfam | Full annotation |
|---|---|---|---|---|---|---|
| 1. | MligTC455_22104 | 0.693 | Mlig455_018878 | RTL1; Rtl1 | RNase H-like domain found in reverse transcriptase | Details |
| 2. | MligTC455_22108 | 0.688 | Mlig455_057403 | RTL1; Rtl1 | RNase H-like domain found in reverse transcriptase | Details |
| 3. | MligTC455_22110 | 0.682 | Mlig455_070381 | Rtl1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Details |
| 4. | MligTC455_26930 | 0.359 | Mlig455_027287 | NAAT1; SLC6A13; Slc6a13 | Sodium:neurotransmitter symporter family | Details |
| 5. | MligTC455_18517 | 0.331 | Mlig455_063416 | Details | ||
| 6. | MligTC455_18518 | 0.323 | Mlig455_066631 | Details | ||
| 7. | MligTC455_03323 | 0.321 | Mlig455_019870 | ApepP; XPNPEP2; Xpnpep2 | Metallopeptidase family M24 | Details |
| 8. | MligTC455_13759 | 0.319 | Mlig455_054273 | TRAF5; Traf3 | TRAF-type zinc finger | Details |
| 9. | MligTC455_22105 | 0.315 | Mlig455_041722 | Rtl1 | RNase H-like domain found in reverse transcriptase | Details |
Similar genes by variation
| Nr. | Mlig455 TC | Pearson corr. | Mlig455 genes | Homologs | Pfam | Full annotation |
|---|
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